Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ABC transporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.5 bits (171), Expect = 3e-17
 Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 30/217 (13%)

Query: 30  WPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE 89
           WPP+  +    +G +V +  AAFA  GY +E    PWSRA+                 Q 
Sbjct: 46  WPPYSGQGLPSEGAAVAVAKAAFAAMGYQLEVDFYPWSRAVKLAH-------------QS 92

Query: 90  RTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGIV-----RGYGYG--DEFMN 142
            T Y+ Y   Y  + V+F+          GL     + +  V     R Y  G   +++N
Sbjct: 93  NTPYVGYFPEYYFDTVQFVFSHPMGMSPLGLLEHKSRPISWVSVKDLRNYRLGVVQDYVN 152

Query: 143 DPSFFRPESTDLKQ---------NLQKLQAGRIDLAVEDELVAKSIITEAGM-NLADFAF 192
                R  + DL+          N++K+ AGRID AV D  V + ++ ++ +  +AD   
Sbjct: 153 TEELDRAIADDLQPAEQVTSDEFNIKKVAAGRIDAAVIDVYVMRYLLKQSRLQGVADKVQ 212

Query: 193 TNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKA 229
            N  +  N     + K  P      A FN+GL  I A
Sbjct: 213 INSQLLANKNLYIAFKNTPEGHRWQAIFNEGLQRIDA 249