Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., extracellular solute-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 33/260 (12%)

Query: 2   MKSIATLISVVLCSFSAWA-QTITAAQDP-------WPPFVM--ENAQQKGLSVDIVTAA 51
           M+++   + ++L S+  +A QT T  Q P       WPP+    E  +  GL VD++ A 
Sbjct: 1   MQAVKIGLVLILFSWPTFAVQTQTICQAPLHVAYNDWPPYSWSDEVGEPLGLDVDLLKAF 60

Query: 52  FATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKA 111
               G  +EF  MP  R+   +  GK+DI+     T ER  Y  +S  Y   QV      
Sbjct: 61  ARRVGCVLEFDKMPARRSHQLMHLGKVDIMMGASKTAEREEYAHFSVPYRLEQVGLF--- 117

Query: 112 GDNFEFAGLASL--------NGKKVGIVRGYGYGDEFMNDPSFFR-----PESTDLKQNL 158
             + +  G+ SL        +  K+ + +   YG+ + +            ES DL +++
Sbjct: 118 --SIDNGGVVSLGSWQQVLDSSLKLLVPQAGWYGEAYESSKRSLAMHNQLVESPDLLKSV 175

Query: 159 QKLQAGRIDLAVEDELVAKSIITEAGMNLADFAFTNQ-AISENPLHVTSGKANPRSEELV 217
           Q L  GR +LA+ D L   S+   A  +     F +   ++E+ +H+   +A    E  V
Sbjct: 176 QMLSRGRAELAIGDAL---SLPFIASQHEKVHLFRHPLRLTESDIHLMFSRAT-FDEARV 231

Query: 218 AAFNKGLAEIKANGTFDKLL 237
            AFN  +     +G    LL
Sbjct: 232 RAFNDAIRGAAEDGEIASLL 251