Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 18/237 (7%)

Query: 10  SVVLCSFSAWAQTITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRA 69
           SV +CS +   QT+          + E  Q  G +V I+ A  A   + +     PW R 
Sbjct: 31  SVRVCSLNLAPQTM----------LNEQGQPDGYAVKILEAIAARLNWRLSIQYYPWVRV 80

Query: 70  LNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIK-KAGDNFEFAG-LASLNGK- 126
           ++  ++G  DI+      ++   Y+ +    +  Q   I  + G + ++ G +A+   K 
Sbjct: 81  VHLAQQGDCDIVLTVLMREDYAQYMAFPAEPILMQRNVIAVRKGSHMQYDGNMANFVRKH 140

Query: 127 KVGIVRGYGYGDEFM--NDPSFFRPEST-DLKQNLQKLQAGRIDLAVEDELVAKSIITEA 183
            + + R     DEF    D  +   + T D + N + L   R++   E++L A  ++ + 
Sbjct: 141 SIAMYRDKAINDEFQQYRDAPWANIQLTKDAETNFKMLLLNRVEAVFENDLTAIMVLKKL 200

Query: 184 GMNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADY 240
              L      +  ++E P ++T  KA   +    A F+K +A+ K   T+  L  +Y
Sbjct: 201 N-QLEQVTLLHPPLNETPAYITFPKAGKLAHS-TALFDKAMADFKQTQTYQALQMEY 255