Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., arginine ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 15/239 (6%)

Query: 5   IATLISVVLCSFSAWAQTITAAQDPWPPFVMENAQQK--GLSVDIVTAAFATQGYTVEFT 62
           +A L+S  + + +A           +PPF    A  +  G  +D+  A       T  FT
Sbjct: 6   LAALLSATVFTATAADTIRFGTSATYPPFESIGADNQIIGFDIDLANALCKQMQETCTFT 65

Query: 63  IMPWSRALNDVKEGKIDILPATW-FTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLA 121
             P+   +  +K  + D++ +    T+ER+  +T++  Y  N    I   G   +FA +A
Sbjct: 66  NQPFDGLIPALKFRRFDVIISGMDITEERSKQVTFTQPYYANTAMIIGPKG---KFASIA 122

Query: 122 SLNGKKVGIVRGYGYGDEFMNDPSFFRPESTDLKQN-LQKLQAGRIDLAVEDELVAKSII 180
            L GK+VG+  G  +    M           D  QN +  L++GR+D  + D  V    +
Sbjct: 123 DLKGKRVGLENGTTHQKYLMEKHPEITTVGYDSYQNAILDLKSGRLDGLLGDTAVLNGWL 182

Query: 181 TEAGMNLADFAFTNQAISENPLHVTSG---KANPRSEELVAAFNKGLAEIKANGTFDKL 236
            ++  NL +       + ++P +  +G      P ++EL+A  N  L  IKANG F K+
Sbjct: 183 -KSNPNLGEVG----ELIKDPQYFGTGVGMAVRPDNKELLAKLNTALEGIKANGEFKKI 236