Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., putative histidine-binding periplasmic protein from Phaeobacter inhibens DSM 17395

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 24/257 (9%)

Query: 2   MKSIATLISVVLCSFSAWAQTITA---------AQDPWPPFVM--ENAQQKGLSVDIVTA 50
           M  I+ L S VL + +  A    A         A +P+PPF     + Q  G  +D++ A
Sbjct: 1   MSMISNLKSTVLAAATVAATCAVAQAEPVKIGVAAEPYPPFASLDSSGQWVGWEIDVINA 60

Query: 51  AFATQGYTVEFTIMPWSRALNDVKEGKIDILPATW-FTQERTAYLTYSDNYLTNQVKFIK 109
             A        T + W   +  +   ++D + A+   T+ER   + +SD Y       + 
Sbjct: 61  VCAAAELDCVITPVAWDGIIPSLTGQQVDAIMASMSITEERLKTIDFSDPYYNTPAVIVA 120

Query: 110 KAGDNFEFAGLASLNGKKVGIVRG---YGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRI 166
               + E A   SL GK VGI        Y  E   D S  R   T  + N Q L AGRI
Sbjct: 121 DKSMDIE-ATPESLAGKVVGIQASTIHQAYAQEHFKD-SELRVYQTQDEAN-QDLFAGRI 177

Query: 167 DLAVEDELVAKSII-TEAG--MNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKG 223
           D    D +     + ++AG    +      ++AI    +     K +    +++AA NKG
Sbjct: 178 DATQADSIAMADFVGSDAGGCCEIKGAVANDEAILGKGVGAGVRKGD---SDVLAALNKG 234

Query: 224 LAEIKANGTFDKLLADY 240
           +A I A+GT  ++ + Y
Sbjct: 235 IAAILADGTHAEITSKY 251