Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 3/228 (1%)

Query: 18  AWAQT-ITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEG 76
           A A+T + +  + +PPF      + G+   +V A F   GY +     P+ RA   +K  
Sbjct: 47  AMAKTPLISVSNDYPPFYSPQMSEWGVVYHLVEAVFEHAGYPLSHEFYPFIRAQTLIKRE 106

Query: 77  KIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGIVRGYGY 136
             D++   W+  ER  ++ +SD  L+  ++  K++     F  +  L    +GI RGY  
Sbjct: 107 LADLIIGVWYRPEREQWIDFSDPLLSVSIRLYKRSDSKIVFRDIKDLKPYLIGIGRGYAN 166

Query: 137 GDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNL-ADFAFTNQ 195
              F          S+D   NL+KL AGR+DL +  E VA+ +I   G            
Sbjct: 167 PVAFGQANLNTEAASSD-AVNLRKLLAGRVDLVLICEDVARYLIERPGSEYNGKLEPVGD 225

Query: 196 AISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADYGIK 243
            +S    H+   K  P + +++A FN+ LAE+  +G   K+LA +G +
Sbjct: 226 PLSVELFHIGVAKHLPNARQILADFNQSLAELHRSGELTKILASHGFE 273