Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., extracellular solute-binding protein family 3 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 26/230 (11%)

Query: 27  QDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWF 86
           Q PW    +   Q +G +VD+  A     G  VEF + P++R L+ V++GK+D     + 
Sbjct: 81  QPPWS--YLHEGQPQGAAVDVARAVLRRLGRNVEFVVTPFNRGLSLVRQGKLDAALTVYR 138

Query: 87  TQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLAS--------LNGKKVGIVRGYGYG- 137
           T ER  +L Y+   L ++   +    D+   A   S           K V +  G+ YG 
Sbjct: 139 TPEREQFLCYTTVPLYDEDVLLMVHPDDRHLANDTSGTARDAILYGDKPVAVALGHSYGP 198

Query: 138 --DEFMNDPSFFRPES-TDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLADFAFTN 194
             D  ++     R  S   L++ +Q L  G +      E   +++       L   A   
Sbjct: 199 TLDAILSRKGLIRTSSFYSLQEGVQALLRGEVAAVPGAEPTLRAL-------LQRIAPGR 251

Query: 195 QAISENPL--HVTSGKANPRSEE---LVAAFNKGLAEIKANGTFDKLLAD 239
           + +   P   +V++  A   +EE   L A F+  L  ++A+G + ++LA+
Sbjct: 252 KLVVLRPAYDYVSAYMAFAPTEENALLAADFDATLGRMRASGEYARILAE 301