Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ABC-type amino acid transport/signal transduction system, periplasmic domain protein from Marinobacter adhaerens HP15

 Score = 59.3 bits (142), Expect = 7e-14
 Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 23/257 (8%)

Query: 3   KSIATLISVVLCSFSAWAQTITAAQDP---------------WPPFVM-ENAQQKGLSVD 46
           + +   + V+L   +A +  + A+QD                +PP+++ + +Q  G+  D
Sbjct: 7   RPVNATLGVLLLVLTALSSPVFASQDTSGEQKVFRFNISPNGYPPYLIGDQSQPSGIMWD 66

Query: 47  IVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVK 106
           +V+      GY V    +P  R    + +G ID  P      +      ++D  +  +  
Sbjct: 67  VVSEVAQRLGYRVIAEQIPRKRVDQMLLDGYIDATPRAREWADDPEKFLFTDAVVDIEEV 126

Query: 107 FIKKAGDNFEFAGLASLNGKKVGIVRGYGYG--DEFMNDPSFFRPE-STDLKQNLQKLQA 163
           F      +F +     L  K +    GY Y   + +  +    R + S D       L  
Sbjct: 127 FFAPVKSSFHYESPDDLISKTIVTHLGYRYPLLEPYFEEGRIRRFDVSRDKDMFTFVLHG 186

Query: 164 GRIDLAVEDELVAKSIITEAGMNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKG 223
            R D AV D LV K I+   G+    F  +N++IS     +   K     +   + FN+ 
Sbjct: 187 DRFDAAVADRLVGKWILRNEGLR-QHFDISNESISNYGFRLMLRKD---WQSFASQFNEE 242

Query: 224 LAEIKANGTFDKLLADY 240
           LA++KANG  D +LA+Y
Sbjct: 243 LAKMKANGELDAILANY 259