Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., bacterial extracellular solute-binding protein, family 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 13/248 (5%)

Query: 1   MMKSIATLISVVLCSFSAWAQTIT--AAQDPWPPFVME-NAQQKGLSVDIVTAAFATQGY 57
           M   +  L+++V  S +A A+ +      + +PP+    + +  G+++DI+ A     G+
Sbjct: 1   MRTFVCLLLAIVFSSSAAVARPVIKYGYDEDYPPWEKNVSGKPVGINIDIMNALADRLGF 60

Query: 58  TVEFTIMPWSRALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVK-FIKKAGDNFE 116
            V +   P+ R L  ++ G+ID+      + ER AY  Y +      ++ FI +      
Sbjct: 61  EVVYRPYPFKRVLVLLESGEIDMTGGLARSAEREAYARYLEPSYQKTIRVFIIRRESGIR 120

Query: 117 FAGLASLNGKKVGIVRGYGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVA 176
               A L   ++G+  G    + F +DP   + E+  + Q  Q L AGR D+ V   +  
Sbjct: 121 LRTYADLIPLRIGVRAGNRLYEPFDSDPRLMKVEAHSVDQLFQMLLAGRTDVIVGGSIQL 180

Query: 177 KSIITEAG----MNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGT 232
           +     +G    + LA +    Q      L   S       E    A  K   ++ A G 
Sbjct: 181 RHAAKVSGYASKVKLAPYTVETQDGGFFALSRASA-----LEGSFDAIQKAFRDLHARGL 235

Query: 233 FDKLLADY 240
            D+++  +
Sbjct: 236 IDRIIESH 243