Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., bacterial extracellular solute-binding proteins, family 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  166 bits (421), Expect = 3e-46
 Identities = 84/222 (37%), Positives = 134/222 (60%), Gaps = 1/222 (0%)

Query: 20  AQTITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKID 79
           ++ + A  DPWPP+        GL+++I++ A    GYTV    +PW RA   ++ G +D
Sbjct: 40  SRPVIATADPWPPYADPAHPAHGLTLEILSLALGRSGYTVTMVYLPWVRAEQRLERGGVD 99

Query: 80  ILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGIVRGYGYGDE 139
           +L   W T+ R     +S  +  N++ F+++AG++F FAG  SL GK VG +RGYGY D 
Sbjct: 100 LLINCWRTEARAKRYLFSRPFARNRLLFMQRAGESFVFAGQESLKGKTVGTIRGYGYTDA 159

Query: 140 FMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLA-DFAFTNQAIS 198
           FM D S  R E T+ K N++KL +GR+DL +EDELVA++ + +   +LA   AF    + 
Sbjct: 160 FMADTSIRREEVTNFKDNVRKLVSGRVDLIIEDELVARTQLEQLPADLAGQVAFIEPPLV 219

Query: 199 ENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADY 240
            N L+V +   NP +++++ AF+ GLA + A+G++  L+  Y
Sbjct: 220 TNDLYVVAYPDNPGAQDIIRAFDAGLAAMIADGSYKALMERY 261