Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 56.2 bits (134), Expect = 7e-13
 Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)

Query: 31  PPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQER 90
           PP+V++ +   GL ++++  A A +G+      +P +R  +++KEGK+D +         
Sbjct: 46  PPYVIQESNS-GLELELLYQALAVKGHNASIHYLPLARTFHELKEGKLDGI--INIKDGM 102

Query: 91  TAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKV------GIVRGYGYGDEFMNDP 144
              + YSD  +  Q   I     +F    +  L+GKKV       I+ G  +      +P
Sbjct: 103 VDKVFYSDVAIRYQNCAISLDDKDFTINSVKDLDGKKVVAFQRASILLGEEFTQMAKTNP 162

Query: 145 SFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGM--NLADFAFTNQAISENPL 202
           S+   E     Q +  L   R D+ V D+ + K  + +A +   L +      AI     
Sbjct: 163 SY--QEQARQIQQVYMLMKHRADVVVMDKNIFKYYLKQAFIEGKLTEAEIKQVAICNRIF 220

Query: 203 HVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADY 240
             T  K    +E++   FN GL +I  +GT + L   Y
Sbjct: 221 PPTEYKFAFLNEQIRDDFNLGLKQITEDGTLNALQEKY 258