Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 62.8 bits (151), Expect = 7e-15
 Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 5/170 (2%)

Query: 18  AWAQTITAAQDPWPPFVMENA--QQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKE 75
           A A+ + A    +     +NA  +  GL VDI+      Q  T+ + + PW RA + V+ 
Sbjct: 22  AQAEELLAVGTSFSQIFEQNAKGEYSGLGVDILNRFAEQQKVTIHYQLAPWRRAQSMVER 81

Query: 76  GKIDILPATWFTQERTAYLTYSD-NYLTNQVKFIKKAGDNFEFAG-LASLNGKKVGIVRG 133
           G+ DIL   + ++ R   L +S   +  + + F  +  +   + G  AS+ G ++G ++G
Sbjct: 82  GQADILIGPYISEARQKVLAFSSLAFYRDDIVFYARTHNPTPWDGNYASIRGLRIGKMQG 141

Query: 134 YGYGDEF-MNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITE 182
           + YG  F     S    E TDLK  +++L  G +DL   +    ++++ +
Sbjct: 142 WNYGYLFNERTKSLTVNEFTDLKSGIERLSRGDLDLLASNVRNTQALLAQ 191