Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 2/219 (0%)

Query: 23  ITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILP 82
           +T     +PPF       +G    +V  AF  +GY       P++RA   VK G+ D + 
Sbjct: 28  LTLVATNYPPFYTNELPDQGGVALVVKEAFKRRGYNASVKFYPFARAALLVKTGQADGII 87

Query: 83  ATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGIVRGYGYGDEFMN 142
             W+ +ER  +  YSD     Q+ F K+  +   F+ L  L    +GI RGY    E   
Sbjct: 88  GLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPLSFSQLTELKPFTIGIGRGYANPPEIAG 147

Query: 143 DPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLAD-FAFTNQAISENP 201
                  E    + NL+KL   RIDL +    +A+ +I + G    D F    + I+   
Sbjct: 148 -AGLTTEEGNSDEMNLKKLFLKRIDLVLIGHNLAEYLIKQHGDEYTDAFEQVGEPIATEV 206

Query: 202 LHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADY 240
            H+    A      LVA FNKGL  +K +G    +L+ +
Sbjct: 207 FHLGVSLAVSDQITLVAEFNKGLESMKKDGRLAAILSRF 245