Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 15/222 (6%)

Query: 25  AAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKID-ILPA 83
           AA+D WPPF  +  Q  G+S  ++ AAF      V   ++P+SRAL   ++G +D +   
Sbjct: 56  AAEDSWPPFANQFGQ--GISHRLIAAAFKQSQVEVNSLVVPYSRALMMAEKGAVDGVFNV 113

Query: 84  TWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASL-NGKKVGIVRGYGYGDEFMN 142
           T        ++  +      +  F ++       A    +  G  VG+++ Y YGDEF  
Sbjct: 114 TREASTEQRFVFGNTPLFVAKASFYQRKQRPLIAANKWEIPKGSIVGVIKSYEYGDEF-- 171

Query: 143 DPSFFRPESTDL------KQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLADFAFTNQA 196
            P   +    ++      +Q +  L  GR+D AV  +LVA+  + + G++       N  
Sbjct: 172 -PELVKQRQLNVITVANQQQLINLLMIGRVDAAVMFDLVAQENLQKMGVSDDVIPAFNNH 230

Query: 197 ISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLA 238
            SE  +++   K NP++ +L    + GL ++KANG + +LL+
Sbjct: 231 SSE--IYLAFSKENPKAAQLAKELDLGLTQLKANGQYQQLLS 270