Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  545 bits (1405), Expect = e-159
 Identities = 284/531 (53%), Positives = 387/531 (72%), Gaps = 2/531 (0%)

Query: 1   MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL 60
           M+ + L++VR+L+V F   +     V+ VSFDI+ GETLA+VGESGSGKSV+ +++++LL
Sbjct: 1   MNQDNLIEVRDLAVEFIVGERRQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLL 60

Query: 61  PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120
           P     HP  +I + G+ LL   +  +R IRG+RI MIFQEPMTSLNP   +  Q+ E +
Sbjct: 61  PYPLAHHPTGTIQYAGQNLLGLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVL 120

Query: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180
             H+ +S   A +R LEL +LV +P+P    +  PHE SGGQ QR+MIAMAL NEP++LI
Sbjct: 121 GIHKGLSGKVATRRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240
           ADEPTTALDVTVQ ++L L+K++QA +GM++L I+HDL +V+ +A RV VM +G +VEQ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKQLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQA 240

Query: 241 STEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYF 300
           S E+LF  P+H YTR L+ + P G+     V   PLL+ ED++V F +K     R   Y 
Sbjct: 241 SCEELFRAPQHPYTRELLGAEPSGTPASNVV-GPPLLQVEDLKVWFPIKKGLFKRTVDYI 299

Query: 301 EAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALSEKQRLA 360
           +AV GI   L QG+TLGIVGESGSGKSTLG A++ L+ S G I F+G+   +L+++Q   
Sbjct: 300 KAVDGIRFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSQGGIRFEGKQLDSLTQQQVRP 359

Query: 361 LKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSI 420
           L++++Q+VFQDP+GSLSPRM V +I+ EGL +H+   ++ E+ Q    AL+EV LDP + 
Sbjct: 360 LRREMQVVFQDPFGSLSPRMCVSQIVGEGLRIHKIG-TEAEQEQAIIAALKEVGLDPETR 418

Query: 421 NRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGY 480
           NRYPHEFSGGQRQRIAIARAL+L+P+ ILLDEPTSALDR+VQ  V+ELL+ +Q + N+ Y
Sbjct: 419 NRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKYNLTY 478

Query: 481 LFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASF 531
           LFISHDLAVVKALS +++V++ GQV+EQG A SIF  PQH YT++L+ A+F
Sbjct: 479 LFISHDLAVVKALSHQLMVVKHGQVVEQGDARSIFAAPQHPYTQQLLEAAF 529