Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  432 bits (1110), Expect = e-125
 Identities = 247/556 (44%), Positives = 347/556 (62%), Gaps = 41/556 (7%)

Query: 4   NPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKN 63
           +PLL++R L + F    G   A++ +   ++PGE++ IVGESGSGKSV+  A+  LLPK 
Sbjct: 3   DPLLEIRQLQICF----GEAIALQGLDLVVQPGESVGIVGESGSGKSVACLAIPGLLPKT 58

Query: 64  ARIHPESSIMF----EGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEA 119
           AR   + +          +LL   + ++R++RGDR+G IFQEP++SLNP    G Q+ EA
Sbjct: 59  ARCSGQIAFRSVAGQSSRDLLTLPERELRQLRGDRLGFIFQEPLSSLNPVFSAGFQLLEA 118

Query: 120 IRCHRNVSQNQAKQRVLELFQLVHL-PDPKGAYQ---KFPHEFSGGQLQRIMIAMALINE 175
           I+ H  +SQ +A+QRV+ L Q V L  +P  A Q   ++PH+ SGGQ QR+MIA+AL   
Sbjct: 119 IQQHLPLSQAEAQQRVIALLQEVQLIREPSQAAQILRRYPHQLSGGQRQRLMIAIALAAN 178

Query: 176 PDILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGD 235
           PD+L+ADEPTTALD TVQA VL+L++ +Q    MA++F++HDLGV+  VADRV+V+ +G 
Sbjct: 179 PDLLLADEPTTALDATVQASVLQLLRRLQQQRQMAMIFVSHDLGVIAEVADRVVVLYRGQ 238

Query: 236 VVEQGSTEQLFLQPEHDYTRMLINSIPK----------------GSKDPVAVD-----AA 274
           VVEQG    +   P+H YT+ L+   P+                G  +P ++        
Sbjct: 239 VVEQGRVADVLNSPQHPYTQGLVACRPQINPRSCYLPTVADFLEGQTEPRSLPPRSPATQ 298

Query: 275 PLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALI 334
           PLL+ E + + +         R+  F+AV+ +S  L  G TLG+VGESG GKS+L R L+
Sbjct: 299 PLLQVEQLGITY-------RGRSTAFQAVQNLSFTLPAGLTLGLVGESGCGKSSLARCLV 351

Query: 335 GLLP-STGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVH 393
           GL+P S GQI    Q     S + R  L++ +QMVFQDP  +L PR TVG  I E L + 
Sbjct: 352 GLVPASEGQIWLDQQPLDLRSSRDRQRLRQTVQMVFQDPAAALDPRWTVGSAILEPLRIK 411

Query: 394 QPHISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEP 453
           QP   +    +  ++ L+ V L  +  +RYPHEFSGGQRQRI IARALI +P  ++ DE 
Sbjct: 412 QPRRDRTADQRLLKQWLQRVDLPTDIGDRYPHEFSGGQRQRICIARALIGQPRLLICDES 471

Query: 454 TSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAES 513
            SALD SVQ  ++ LLK++Q    + YLFISHDLAVV+ +SDR+LVM +GQ+ E    E 
Sbjct: 472 VSALDVSVQAQILNLLKQLQAELGLTYLFISHDLAVVRYMSDRILVMNQGQLEEDSPTEQ 531

Query: 514 IFHNPQHEYTKKLIAA 529
           +F  PQ +YT++LIAA
Sbjct: 532 LFQRPQSDYTRRLIAA 547



 Score =  199 bits (506), Expect = 2e-55
 Identities = 112/259 (43%), Positives = 163/259 (62%), Gaps = 9/259 (3%)

Query: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64
           PLLQV  L +++        AV+N+SF +  G TL +VGESG GKS     L+ L+P + 
Sbjct: 299 PLLQVEQLGITYRGRSTAFQAVQNLSFTLPAGLTLGLVGESGCGKSSLARCLVGLVPAS- 357

Query: 65  RIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHR 124
               E  I  + + L  ++    +R+R   + M+FQ+P  +L+P   VG  + E +R  +
Sbjct: 358 ----EGQIWLDQQPLDLRSSRDRQRLR-QTVQMVFQDPAAALDPRWTVGSAILEPLRIKQ 412

Query: 125 NVSQNQAKQRVLELF-QLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADE 183
                 A QR+L+ + Q V LP   G   ++PHEFSGGQ QRI IA ALI +P +LI DE
Sbjct: 413 PRRDRTADQRLLKQWLQRVDLPTDIG--DRYPHEFSGGQRQRICIARALIGQPRLLICDE 470

Query: 184 PTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTE 243
             +ALDV+VQA++L L+K++QA +G+  LFI+HDL VV++++DR+LVM +G + E   TE
Sbjct: 471 SVSALDVSVQAQILNLLKQLQAELGLTYLFISHDLAVVRYMSDRILVMNQGQLEEDSPTE 530

Query: 244 QLFLQPEHDYTRMLINSIP 262
           QLF +P+ DYTR LI +IP
Sbjct: 531 QLFQRPQSDYTRRLIAAIP 549