Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  471 bits (1213), Expect = e-137
 Identities = 259/554 (46%), Positives = 356/554 (64%), Gaps = 32/554 (5%)

Query: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQL-LPKN 63
           P+L V NL  SF  +      V+ VSFDI   ET+A+VGESGSGKSV+  ++M+L  P+ 
Sbjct: 26  PVLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRG 85

Query: 64  ARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCH 123
            +I  E S+   G+ELL+ +D +MR+IRG+ I MIFQEPMTSLNP + +G Q+AE++  H
Sbjct: 86  TKI--EGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILH 143

Query: 124 RNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADE 183
           R +S+ QA+   + L + V +P  K  + ++PH FSGG  QR+MIAMAL  +P +LIADE
Sbjct: 144 RGLSRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADE 203

Query: 184 PTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTE 243
           PTTALDVT+QA++L LIKE+Q   GM++LFITHD+GVV  +ADR +VM KG  VE  ST+
Sbjct: 204 PTTALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTD 263

Query: 244 QLFLQPEHDYTRMLINSIPK-GS--------------------------KDPVAVDAAPL 276
            +F +P H YTR L++++PK GS                           D V V   P+
Sbjct: 264 DIFNRPNHPYTRSLLSAVPKLGSMAGRSRPMRFPVVDRSTGEADVPVEVPDTVKVSERPV 323

Query: 277 LKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIGL 336
           L+   +  +F VK    S       AV+ +S  +K GETL +VGESG GKST GR+++ L
Sbjct: 324 LEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMRL 383

Query: 337 L-PSTGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQP 395
           + PS G +   G D   LS+ +    +  +QM+FQDPY SL+PRM +G  I E LL++  
Sbjct: 384 VEPSGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLINGK 443

Query: 396 HISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTS 455
              + E   +    L++V L P+   R+PHEFSGGQRQRI IARAL LEP  I+ DE  S
Sbjct: 444 G-GQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVS 502

Query: 456 ALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIF 515
           ALD SV+  V+ L+ ++Q R  + YLFISHD+AVV+ +S RV VM  G+++E GS E+IF
Sbjct: 503 ALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIF 562

Query: 516 HNPQHEYTKKLIAA 529
            NPQH YT++L++A
Sbjct: 563 QNPQHPYTRRLLSA 576



 Score =  209 bits (531), Expect = 3e-58
 Identities = 126/313 (40%), Positives = 190/313 (60%), Gaps = 20/313 (6%)

Query: 1   MSPNPLLQVRNL-------SVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVST 53
           +S  P+L+V  L       S  F+T  G V AV+NVSF I+ GETLA+VGESG GKS + 
Sbjct: 318 VSERPVLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTG 377

Query: 54  NALMQLLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVG 113
            ++M+L+  +  +     ++ +G ++L  +  ++R  R + + MIFQ+P  SLNP M +G
Sbjct: 378 RSVMRLVEPSGGL-----VLLDGVDVLKLSQNELRHQR-NHMQMIFQDPYASLNPRMNIG 431

Query: 114 VQVAEAIRCHRNVSQNQAKQRVLELFQLVHL-PDPKGAYQKFPHEFSGGQLQRIMIAMAL 172
             +AE +  +    Q++   +V EL Q V L PD     ++FPHEFSGGQ QRI IA AL
Sbjct: 432 TAIAEPLLINGKGGQSEVADKVAELLQKVGLSPDMA---KRFPHEFSGGQRQRICIARAL 488

Query: 173 INEPDILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMC 232
             EP +++ADE  +ALDV+V+++V+ L+ ++QA MG+A LFI+HD+ VV+ V+ RV VM 
Sbjct: 489 ALEPKLIVADEAVSALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMY 548

Query: 233 KGDVVEQGSTEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYF 292
            G++VE GS E +F  P+H YTR L++++P    DP        +  ++I+  F    Y 
Sbjct: 549 LGEIVEAGSREAIFQNPQHPYTRRLLSAVP--IADPARRLQKRTVSNDEIKSPFRPADY- 605

Query: 293 ISRRNQYFEAVKG 305
           +    QY E   G
Sbjct: 606 VQPVRQYREVTPG 618