Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  534 bits (1376), Expect = e-156
 Identities = 277/531 (52%), Positives = 377/531 (70%), Gaps = 2/531 (0%)

Query: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64
           P++  R ++VSF   +G V AVK+VSF +  GET+AIVGESGSGKSV+   +M LL K A
Sbjct: 24  PVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRA 83

Query: 65  RIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHR 124
            I P++ I ++G ++L  +  + R +RGDRI MIFQEPM+SLNP   +G Q+ EAIR HR
Sbjct: 84  TIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHR 143

Query: 125 NVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEP 184
            VS+  A +R LEL + V +PDP+    ++PH+ SGGQ QR+MIAMAL N+PD+LIADEP
Sbjct: 144 RVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEP 203

Query: 185 TTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQ 244
           TTALDVTVQA++L LI+++Q  +GMA++ ITHDL VV+  +D V VM  G+V E  +TE 
Sbjct: 204 TTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEA 263

Query: 245 LFLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKF-LVKPYFISRRNQYFEAV 303
           LF  P+H YTR L++S P GS +P+  DA  LL   ++RV F L K  F     +   AV
Sbjct: 264 LFADPQHAYTRRLLSSEPSGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELVAV 323

Query: 304 KGISLELKQGETLGIVGESGSGKSTLGRALIGLLPST-GQIAFKGQDFRALSEKQRLALK 362
            G+SL L++ ETLG+VGESGSGK+T G+ALI LL +  G+I F+G+       K    L+
Sbjct: 324 DGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLR 383

Query: 363 KDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSINR 422
             IQ+VFQDP+ SL+PRM+VG+II EGL+V+    ++ +R++R   AL    +  N ++R
Sbjct: 384 SKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNILSR 443

Query: 423 YPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLF 482
           +PHEFSGGQRQRIAIARA+ LEP FILLDEPTSALD SVQ  +IELL+ +Q  R + YL 
Sbjct: 444 FPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLV 503

Query: 483 ISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASFDI 533
           ISHDL VV+AL  RV+VMQ G+++E+G    + +NP+  YT++L+ A+F++
Sbjct: 504 ISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKAAFEV 554