Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., mureinpeptideoligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  407 bits (1045), Expect = e-118
 Identities = 241/565 (42%), Positives = 335/565 (59%), Gaps = 45/565 (7%)

Query: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65
           LL+V  L ++F+   G V+AV+  +F I PG   A+VGESGSGKS  + A+M +LP  A 
Sbjct: 7   LLRVEGLRITFSVLGGEVEAVRGANFRILPGRVTALVGESGSGKSAISQAIMGILPSVAS 66

Query: 66  IHPESSIMFEGEEL---------LNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQV 116
           +     ++F   E          L++    ++ IRG RI  IFQEPMTSL+P   +G Q+
Sbjct: 67  VG--GRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHTIGNQI 124

Query: 117 AEAIRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEP 176
           +E ++ H +  +   ++R  EL   V   DPK AY  +P E SGG  QR MIAMALI  P
Sbjct: 125 SEVLKIHTDADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMALICRP 184

Query: 177 DILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDV 236
            +LIADEPTTALDVTVQA++L+L++E+Q+ + MA+L ITHDLGVV  +AD V+V+  G++
Sbjct: 185 ALLIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVVIYHGEI 244

Query: 237 VEQGSTEQLFLQPEHDYTRMLINSIPKGSKDP---------VAVDAAPLLKAEDIR---- 283
           VE G  + +F  P H Y + L+ ++P     P         V V A  ++   +++    
Sbjct: 245 VEAGPVDAIFRNPRHPYLKGLMAAVPHFDMKPGERLKALREVPVKAGAIVGDREVKKAAG 304

Query: 284 ------VKFLVKPYFISRRNQYF--------EAVKGISLELKQGETLGIVGESGSGKSTL 329
                 V+ L K  F +R + +F         AV  +S ++++GE LG+VGESG GK+T+
Sbjct: 305 PNVLVSVRNLSKT-FSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKTTV 363

Query: 330 GRALI-GLLPSTGQIAFK----GQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGE 384
            + L+  + P  G I F       D   L   +  AL+  IQMVFQDP  SLSPRMTV  
Sbjct: 364 SKILMRAVTPDKGTITFDDGEGALDVLKLDGGELKALRAKIQMVFQDPVSSLSPRMTVKN 423

Query: 385 IITEGLLVHQPHISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILE 444
           I++E L +H     K  R +  R  L+ V LD   INRYPH FSGGQRQRI IARAL L 
Sbjct: 424 ILSEPLEIHGRGTPK-SREEHVRSLLQAVGLDQRFINRYPHSFSGGQRQRIGIARALALV 482

Query: 445 PSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQ 504
           P  ++ DEP SALD SVQ  ++ LLK++QK   +  LFISH+LAVV  ++DR+ VM  G+
Sbjct: 483 PQLLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMCAGR 542

Query: 505 VMEQGSAESIFHNPQHEYTKKLIAA 529
           ++E    E +  NP H YT+ L+AA
Sbjct: 543 IVELAPREVLMRNPVHPYTRSLLAA 567



 Score =  184 bits (468), Expect = 7e-51
 Identities = 111/273 (40%), Positives = 163/273 (59%), Gaps = 21/273 (7%)

Query: 3   PNPLLQVRNLSVSFTTND------GVV---DAVKNVSFDIRPGETLAIVGESGSGKSVST 53
           PN L+ VRNLS +F+T        G      AV NVSFDIR GE L +VGESG GK+  +
Sbjct: 305 PNVLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKTTVS 364

Query: 54  NALMQLLPKNARIHPESSIMFEGEE----LLNKTDTQMRRIRGDRIGMIFQEPMTSLNPY 109
             LM+ +  +     + +I F+  E    +L     +++ +R  +I M+FQ+P++SL+P 
Sbjct: 365 KILMRAVTPD-----KGTITFDDGEGALDVLKLDGGELKALRA-KIQMVFQDPVSSLSPR 418

Query: 110 MRVGVQVAEAIRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIA 169
           M V   ++E +  H   +    ++ V  L Q V L   +    ++PH FSGGQ QRI IA
Sbjct: 419 MTVKNILSEPLEIHGRGTPKSREEHVRSLLQAVGLD--QRFINRYPHSFSGGQRQRIGIA 476

Query: 170 MALINEPDILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVL 229
            AL   P +LI DEP +ALDV+VQA++L L+K++Q  +G+ +LFI+H+L VV ++ADR+ 
Sbjct: 477 RALALVPQLLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIA 536

Query: 230 VMCKGDVVEQGSTEQLFLQPEHDYTRMLINSIP 262
           VMC G +VE    E L   P H YTR L+ ++P
Sbjct: 537 VMCAGRIVELAPREVLMRNPVHPYTRSLLAAVP 569