Pairwise Alignments
Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 592 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 402 bits (1034), Expect = e-116
Identities = 217/518 (41%), Positives = 322/518 (62%), Gaps = 8/518 (1%)
Query: 29 VSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNARIHPESSIMFEGEELLNKTDTQMR 88
V +R GE A+VG SGSGKS++ A++ LLP AR+ +I FEG +L + ++ +R
Sbjct: 33 VGLTMRRGEIHALVGASGSGKSLTARAVLGLLPPGARL-THGNIRFEGAQLAHAPESALR 91
Query: 89 RIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRNVSQNQAKQRVLELFQLVHLPDPK 148
+RGDRIGM+FQ+P++SLNP + QVAE + H+ + +A+ R LEL +V L +P+
Sbjct: 92 ALRGDRIGMVFQDPLSSLNPLHTIERQVAEPLAIHKGIRGPRARARALELLDMVGLDEPE 151
Query: 149 GAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPTTALDVTVQAEVLRLIKEIQANMG 208
+PH+ SGGQ QR+ +AMAL N+P +LIADEPTTALD TVQ+++LRLI ++ +G
Sbjct: 152 ARLASYPHQLSGGQRQRVALAMALANDPALLIADEPTTALDTTVQSQILRLIDTLRHRLG 211
Query: 209 MAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQLFLQPEHDYTRMLINSIPKGSKDP 268
M +L ++HDLGVV+ +AD + VM G +VE T ++F P TR L+ + P
Sbjct: 212 MGVLIVSHDLGVVRSLADVIHVMDAGCIVESAPTTRIFSAPASPVTRALLGAEGPSGPAP 271
Query: 269 VAVDAA---PLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSG 325
+ A LL+A D+ V F + R +A+ S L++GE LG+VGESGSG
Sbjct: 272 LPETTATQPALLEARDMGVTFTRQRGLFGLRKTGHDALVSASFTLRRGECLGVVGESGSG 331
Query: 326 KSTLGRALIGLLPSTGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEI 385
KSTL A++ L+ S G++ GQ L E+ L++ +Q VFQDP+ +L+PRMTV E
Sbjct: 332 KSTLALAVLRLIASRGRVTLDGQRLDTLDEEALRPLRRKVQAVFQDPFSALNPRMTVAES 391
Query: 386 ITEGLLVHQPHISKLERMQ----RARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARAL 441
I EGL H P + + ++ + AL+EV L + + RYP E SGGQ QR+ IARAL
Sbjct: 392 IAEGLTTHFPDLRGRQGLKAMHDKTLAALDEVGLSDDFMQRYPGELSGGQCQRVVIARAL 451
Query: 442 ILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQ 501
L P ++LDEPTS+LDR++Q V+ LL+++Q R + LFI+HDL++V++ RV+V+
Sbjct: 452 ALRPEVLVLDEPTSSLDRALQFQVVALLRDLQLRHGMACLFITHDLSLVRSFCHRVMVLH 511
Query: 502 KGQVMEQGSAESIFHNPQHEYTKKLIAASFDILEENAA 539
+G V+E G + P T+ L+ A+ +A+
Sbjct: 512 RGHVVEAGPTPVVLDAPATATTRALVEAALGCAPASAS 549
Score = 157 bits (397), Expect = 1e-42
Identities = 101/264 (38%), Positives = 145/264 (54%), Gaps = 15/264 (5%)
Query: 276 LLKAEDIRVKF--LVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRAL 333
LL ED+ + F P S R + G+ L +++GE +VG SGSGKS RA+
Sbjct: 5 LLHIEDLHLAFGGSAHPPAASGR----AVLHGVGLTMRRGEIHALVGASGSGKSLTARAV 60
Query: 334 IGLLP-----STGQIAFKGQDFRALSEKQRLALKKD-IQMVFQDPYGSLSPRMTVGEIIT 387
+GLLP + G I F+G E AL+ D I MVFQDP SL+P T+ +
Sbjct: 61 LGLLPPGARLTHGNIRFEGAQLAHAPESALRALRGDRIGMVFQDPLSSLNPLHTIERQVA 120
Query: 388 EGLLVHQPHISKLERMQRARRALEEVRLDPNS--INRYPHEFSGGQRQRIAIARALILEP 445
E L +H+ I RA L+ V LD + YPH+ SGGQRQR+A+A AL +P
Sbjct: 121 EPLAIHK-GIRGPRARARALELLDMVGLDEPEARLASYPHQLSGGQRQRVALAMALANDP 179
Query: 446 SFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQV 505
+ ++ DEPT+ALD +VQ ++ L+ ++ R +G L +SHDL VV++L+D + VM G +
Sbjct: 180 ALLIADEPTTALDTTVQSQILRLIDTLRHRLGMGVLIVSHDLGVVRSLADVIHVMDAGCI 239
Query: 506 MEQGSAESIFHNPQHEYTKKLIAA 529
+E IF P T+ L+ A
Sbjct: 240 VESAPTTRIFSAPASPVTRALLGA 263
Score = 155 bits (391), Expect = 5e-42
Identities = 93/265 (35%), Positives = 149/265 (56%), Gaps = 17/265 (6%)
Query: 6 LLQVRNLSVSFTTNDGVV-------DAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQ 58
LL+ R++ V+FT G+ DA+ + SF +R GE L +VGESGSGKS A+++
Sbjct: 282 LLEARDMGVTFTRQRGLFGLRKTGHDALVSASFTLRRGECLGVVGESGSGKSTLALAVLR 341
Query: 59 LLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAE 118
L+ R + +G+ L + +R +R ++ +FQ+P ++LNP M V +AE
Sbjct: 342 LIASRGR------VTLDGQRLDTLDEEALRPLR-RKVQAVFQDPFSALNPRMTVAESIAE 394
Query: 119 AIRCHRNVSQNQAKQRVLELFQLVHLPD---PKGAYQKFPHEFSGGQLQRIMIAMALINE 175
+ H + + + + L L + Q++P E SGGQ QR++IA AL
Sbjct: 395 GLTTHFPDLRGRQGLKAMHDKTLAALDEVGLSDDFMQRYPGELSGGQCQRVVIARALALR 454
Query: 176 PDILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGD 235
P++L+ DEPT++LD +Q +V+ L++++Q GMA LFITHDL +V+ RV+V+ +G
Sbjct: 455 PEVLVLDEPTSSLDRALQFQVVALLRDLQLRHGMACLFITHDLSLVRSFCHRVMVLHRGH 514
Query: 236 VVEQGSTEQLFLQPEHDYTRMLINS 260
VVE G T + P TR L+ +
Sbjct: 515 VVEAGPTPVVLDAPATATTRALVEA 539