Pairwise Alignments

Query, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  508 bits (1308), Expect = e-148
 Identities = 258/526 (49%), Positives = 368/526 (69%), Gaps = 3/526 (0%)

Query: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65
           +LQVRNL V F  +  V +AVK VSFD+  GET+A+VGESGSGKSV+  + + LLP +A 
Sbjct: 5   VLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDSAE 64

Query: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125
           +    SI + G E++   +  +RR+RG+ +  IFQEPMTSLNP   +  Q+ E++  H+ 
Sbjct: 65  V--SGSITYAGTEMVGAPERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLTLHQG 122

Query: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185
           ++ + A+ RV+EL + V + D +     +PH+ SGGQ QR+MIAMAL N PD+LIADEPT
Sbjct: 123 LTGDAARARVIELLEKVGIRDAESRLGAYPHQLSGGQRQRVMIAMALANGPDLLIADEPT 182

Query: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245
           TALDVT+QA++L L+ +++   GM++LFITHDL +V+ +ADRV VM  G++VE G T ++
Sbjct: 183 TALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGPTAEI 242

Query: 246 FLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYFEAVKG 305
           F  P+H YTR L+ + P G  DPV  DA  + + + ++V F ++   + R   + +AV  
Sbjct: 243 FANPQHPYTRKLLAAEPSGQPDPVPEDAPVVAETDSLKVWFPIQRGILRRTVGHVKAVNN 302

Query: 306 ISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALSEKQRLALKKDI 365
            +L ++ GETLG+VGESGSGK+TL  A++ L+ S G+I + G++ +    +    L+KD+
Sbjct: 303 ATLNVRAGETLGVVGESGSGKTTLALAILRLISSEGRIVYAGENIQGWKSRDLRRLRKDM 362

Query: 366 QMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSINRYPH 425
           Q+VFQDPYGSLSPRMT+ +II EGL VH        R   A   L EV LDP  ++RYPH
Sbjct: 363 QVVFQDPYGSLSPRMTIAQIIAEGLGVHGLEPGADPRRMVA-EILVEVGLDPAMMDRYPH 421

Query: 426 EFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISH 485
           EFSGGQRQRIAIARA+IL P  ++LDEPTSALD +VQ+ ++ELL+ +Q++  + Y+FISH
Sbjct: 422 EFSGGQRQRIAIARAMILRPKLVVLDEPTSALDMTVQVQIVELLRALQRKYGLAYIFISH 481

Query: 486 DLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASF 531
           DL VV+ALS +V+VM++G V+E G    IF  P+ +YTK+L+AA+F
Sbjct: 482 DLKVVRALSHKVIVMRQGDVVEMGEGRQIFERPRSDYTKQLLAAAF 527