Pairwise Alignments

Query, 786 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., ATP-dependent protease LonB from Methanococcus maripaludis S2

 Score = 60.5 bits (145), Expect = 3e-13
 Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 20/190 (10%)

Query: 548 METFVNGTTLIQTEGVAIGQVNALSVLATSDHAFGMPNRIT--ATTSYGEGEIIDI---- 601
           ++ F     ++  +   IG ++ L+VL  +D    +   IT    + +    +++I    
Sbjct: 485 LKNFKRYKNIVSNDKPKIGVIHGLAVLG-ADGLGDVTKIITKIVKSKHPRTNLLNISGDL 543

Query: 602 -ERNVDLGGSIHSKGVMILSAYLSSVFGRTARIPLTTT-----ITFEQSYGGVDGDSASM 655
            + ++ L  ++  K V   +  ++   G  A+  L        I F QSY  +DGDSA+ 
Sbjct: 544 AKHSITLASALSKKLVSDGTLSIAKAKGEVAKEDLDLAEHEIYIQFSQSYSKIDGDSATA 603

Query: 656 AEFCAIVSAFSKQPNRQDIAITGSMNQFGESQPIGGLNEKIEGFFDVCTIKGRKDTQGVI 715
           A   +I+S+    P +QD  ITGS++  GE   IGG+NEKI    +          + VI
Sbjct: 604 AACLSIISSLLNIPLKQDFCITGSLDLNGEILAIGGVNEKINAAKEY-------GFKRVI 656

Query: 716 IPRSNMHNLM 725
           IP+SN  +++
Sbjct: 657 IPQSNFEDVI 666



 Score = 47.4 bits (111), Expect = 3e-09
 Identities = 33/164 (20%), Positives = 79/164 (48%), Gaps = 7/164 (4%)

Query: 353 GSLHKANGGVLLMDAVKVLEQPYVWDGLKRALRSRQLSFTSLEKEVTLTGTVSLDPEPIP 412
           G++H+A+ G+L +D +K +    V D +  AL+ +QL+ +        +   S++  PIP
Sbjct: 232 GAIHEAHKGILYVDEIKTMPVD-VQDYILTALQDKQLAISGRNPN---SSGASVETNPIP 287

Query: 413 LDVKIILFGDYRTYELLAHYDPEFSELFRVTADFADEMPRDADSELHYARFISSIVHDAN 472
            D+ +I+ G+    +  ++      +         ++M  + ++     +FI   + + N
Sbjct: 288 CDLTLIMSGN---MDDASNLRAPLLDRIDYKVVLKNKMDNNQENRDKLLQFIVQELENNN 344

Query: 473 MLHCDRKAIARIIEHSSRTTGDQTKLSLHSAHIANLLRESNYVA 516
           +     +A   I+  +   +G + KL+L    ++N+++ +N +A
Sbjct: 345 LRPMSYEACCEIVRMAQLLSGSKNKLTLRLRQLSNIIKMANDIA 388