Pairwise Alignments

Query, 786 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 806 a.a., ATP-dependent protease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1048 bits (2710), Expect = 0.0
 Identities = 518/787 (65%), Positives = 647/787 (82%), Gaps = 7/787 (0%)

Query: 6   LSFEQLYQVAKLEKL--ECKSTKELAPIDEIVGQERAQKAVEFAMSIKEKGYNIYAIGRN 63
           L+ +Q+Y+ ++L++L  EC ST +L P+D+IVGQERAQ+AVEFAM IKEKGYNIYAIG+N
Sbjct: 13  LTSQQIYRRSELQQLSAECHSTAQLTPLDDIVGQERAQQAVEFAMGIKEKGYNIYAIGQN 72

Query: 64  GLGKRTMILRYLSRHQHDVNKLYDWCYVANFEDVRVPKVLKLPCGIGIQFRQDIEKLMTK 123
           GLGKRTM+LRYL+RH      L+DWCYV NF+D R PKVLKL  G G++F++ IEKLM K
Sbjct: 73  GLGKRTMMLRYLNRHDPIEPALFDWCYVVNFDDTRSPKVLKLTAGTGLEFKKSIEKLMLK 132

Query: 124 LVTAIPLAFDNEIYFSRAEKLKNQLAQKQESELESITRTAKERGVSLTLTPQGEYQFVAL 183
           LV A+PLAFDNE+Y++RAEKLK+QL QKQE+ L  ++  AK++ +SL+LT QG+YQ +AL
Sbjct: 133 LVRALPLAFDNEMYYARAEKLKSQLTQKQEAVLTELSEEAKQKNISLSLTMQGDYQMIAL 192

Query: 184 NGEEMHTEETFDALSKREQEQFSNTIDELEVSLRNMVRQLTEWEESYSEKIKKLNDEVTL 243
           NG+E H E TF AL++ E+ QF + I+ LEV LR+++RQ TEWEE +S+  ++ +++V  
Sbjct: 193 NGDEPHDEATFSALTEAERNQFESNINGLEVKLRSIIRQNTEWEEEFSDTQQEHDEQVAK 252

Query: 244 DVIAHFIKKLKLDYSKYPEIKAYLTELQKDIVENVEIFLDEGADQGELANASLDKKMPRR 303
           DV+ HF K LK  Y   P+++A+LT +Q DI+ N++IFL+E  +Q  LA ASL+KKMPRR
Sbjct: 253 DVLVHFFKPLKDKYKHQPDVRAFLTGMQADILSNLDIFLEESEEQLALAYASLEKKMPRR 312

Query: 304 YKVNVLVSRNAEEFPIVVEESPNYHSLFGYIETATYKGTVFTDFSLIRPGSLHKANGGVL 363
           Y+VNVLVS+  +++PIVVEESP+YHSLFGY+E AT++GTVFTDFSLIRPGSLHKANGGVL
Sbjct: 313 YQVNVLVSQGEQKYPIVVEESPSYHSLFGYVENATFRGTVFTDFSLIRPGSLHKANGGVL 372

Query: 364 LMDAVKVLEQPYVWDGLKRALRSRQLSFTSLEKEVTLTGTVSLDPEPIPLDVKIILFGDY 423
           LMDA+KVLE+PYVWDGLKRALRSR+L  +SLE+EV+L+GT+SL PEPIPLDVKIILFGD+
Sbjct: 373 LMDAIKVLERPYVWDGLKRALRSRKLDLSSLEREVSLSGTISLAPEPIPLDVKIILFGDH 432

Query: 424 RTYELLAHYDPEFSELFRVTADFADEMPRDADSELHYARFISSIVHDANMLHCDRKAIAR 483
            TY+LL HYD +F ELFRVTADF D M R   SE HYARFISSIVHD NMLHCDR AIAR
Sbjct: 433 ETYQLLQHYDADFIELFRVTADFEDVMDRSDASEAHYARFISSIVHDNNMLHCDRSAIAR 492

Query: 484 IIEHSSRTTGDQTKLSLHSAHIANLLRESNYVAKQANANLIRQIHVEEALRNQELRVNRL 543
           IIE+SSR   DQ KLSLHSA+IANLLRESN+ AK  ++  I + HVE+AL+NQ+ RV+RL
Sbjct: 493 IIEYSSREAQDQQKLSLHSANIANLLRESNFCAKAVSSKRIEKQHVEQALKNQQKRVSRL 552

Query: 544 QQSMMETFVNGTTLIQTEGVAIGQVNALSVLATSDHAFGMPNRITATTSYGEGEIIDIER 603
             ++ME+FVNGTTLI T    +GQ+NALSV++TS+H FG+PNRITATT+YG+GE++DIE 
Sbjct: 553 HDNIMESFVNGTTLINTHDKVVGQINALSVVSTSEHQFGLPNRITATTAYGKGEVLDIEH 612

Query: 604 NVDLGGSIHSKGVMILSAYLSSVFGRTARIPLTTTITFEQSYGGVDGDSASMAEFCAIVS 663
            V LGG IHSKGV+IL+AYL+SV G+TA+IPLTT +TFEQSY GVDGDSASMAE CAI+S
Sbjct: 613 RVKLGGRIHSKGVLILTAYLASVLGKTAQIPLTTYLTFEQSYSGVDGDSASMAECCAIIS 672

Query: 664 AFSKQPNRQDIAITGSMNQFGESQPIGGLNEKIEGFFDVCTIKGRKDTQGVIIPRSNMHN 723
           A S+ P RQDIAITGSMNQFGE+QPIGG+NEKIEGFFDVC IKGR  +QGVIIP SN+ N
Sbjct: 673 AISELPLRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCQIKGRTSSQGVIIPESNIAN 732

Query: 724 LMLRADVVKAVEKGEFHIWAIDHVTEAIEIFTGKPAGVATDDGS-----YPVDTVFGLAQ 778
           LMLR D+V+AVE+GEFHIWAI+HVT+A+ +  GK A     + S     Y  + +FG+AQ
Sbjct: 733 LMLRQDIVEAVERGEFHIWAINHVTQAMTLLLGKTAATVQTNESKHIDQYAPECIFGIAQ 792

Query: 779 AKLNALR 785
            KLNALR
Sbjct: 793 QKLNALR 799