Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  221 bits (564), Expect = 4e-62
 Identities = 138/366 (37%), Positives = 215/366 (58%), Gaps = 11/366 (3%)

Query: 202 AQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQG--DLSVKADA 259
           A+  + V++ +++ ++  L++ +L   L+   IV P+    + M  +A G  DL+   D 
Sbjct: 184 AEFQSQVIKASVVGLVITLLMGLLLT-LIVRSIVGPLQETVNAMANIASGESDLTRTLDT 242

Query: 260 DGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIE 319
            G++E+ +L++  N    +L   V QL   +  +  +S+EL     QA+  +Q +  ++E
Sbjct: 243 HGQDEVTQLARHFNAFTAKLRQVVTQLQASASALGQSSSELGNDAAQAQERSQQQSQQME 302

Query: 320 QVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAAR 379
            VA+A+NE+     +V+ NA  A    R+A+  A+ G      S Q  ++++  ++ A  
Sbjct: 303 LVATAINEVTYGVQDVAKNAEHAANEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVE 362

Query: 380 VVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAAR 439
           V+  L  +S QI +V+EVIR +++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA R
Sbjct: 363 VIRTLASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQR 422

Query: 440 TQASTKEIQAIIEELQTQSTMA----NDSMQTSLDMLTQNKALTAKANDALIGITESVSD 495
           TQ ST EIQA+IE LQT S  A     DS + S   LT  +A  A A  +L  I +++ +
Sbjct: 423 TQKSTAEIQAMIERLQTHSEAAVKVIGDSSRAS--QLTIEQAGLAGA--SLNAIGQALRN 478

Query: 496 INDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQ 555
           +N  NA +A+A  QQ+HV +DIN+NV+  + L H       QS+ AS  L  L+E+    
Sbjct: 479 LNSLNASIASATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASTRLKALSEQLNGL 538

Query: 556 LSFFKL 561
           L+ F++
Sbjct: 539 LTQFRV 544