Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  233 bits (595), Expect = 1e-65
 Identities = 172/547 (31%), Positives = 289/547 (52%), Gaps = 19/547 (3%)

Query: 23  SLKNLSIRLQVLLPVLFTMIAL-VIALWITKVN-LTHEQQAIADNTHALVRYKDTIAQID 80
           SL++L+I  +  L   F +IAL V+ L +   N ++  +QA  +     V     +A + 
Sbjct: 2   SLRSLNIAPRAFLG--FAVIALLVVILGVFAANRMSVIRQASLEMEQTQVPSVGYLANVL 59

Query: 81  DTIYPLRISAVY--------AIYDAERRNNFIAELREGLTEVQSALSSIEQDAQFSRDVP 132
           + +  +RI +          ++ +AE R   + E         +AL S  Q+A+  +   
Sbjct: 60  ENVLRMRILSFRILVNRDPASLTEAESRIGVLVEKLNKANSSYAALPSTPQEAELYK--- 116

Query: 133 VVKQSIEIYVAESQKMVALFNRLDQGLATREEANVFIQSFRETGNRMISAINDLSQKVNH 192
           V   ++E Y+   ++M+ L +R ++    R   N  I   +E  + M   +N L      
Sbjct: 117 VFSATLEKYLQAQKEMLDL-SRQNKADELRTHINTRI---KEGTDLMGEQLNKLIAINVA 172

Query: 193 YATTSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGD 252
            A+ S  ++ +     +   +I  +S  + +V+ A LL+  IVAP+N      R +A G+
Sbjct: 173 GASESSAKAGEHYDSAITGIIIVSISAALATVVLALLLTRSIVAPLNRALEAARTIASGN 232

Query: 253 LSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQ 312
           L      DG++E  +L Q + T    L  T+EQ+   + ++ +A+ EL+AV  ++    Q
Sbjct: 233 LVQVIADDGKDEPGRLLQALATMQVSLRQTIEQIAGSATQLGAAAQELSAVTQESSRGLQ 292

Query: 313 MELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMAL 372
            +  EIEQ A+AVNE+ +  + V+ NA S    + ++ + A+ G     E+  A + M  
Sbjct: 293 QQHNEIEQAATAVNEMTAAVEEVARNAVSTSEASNQSTQAAQEGRTRVVETVDAIQTMTH 352

Query: 373 ALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADE 432
            +   A ++  L  Q   I  V++VIR +++QTNLLALNAAIEAARAGE+GRGFAVVADE
Sbjct: 353 DVQATASMIEGLAVQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADE 412

Query: 433 VRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITES 492
           VR LA RT  ST+EI+ ++  +Q  +  A  SMQ S         +   A  AL  IT+S
Sbjct: 413 VRALAHRTAQSTQEIEKMVAGIQNGTGQAVQSMQQSNQRTQSTLEMARAAGVALEQITQS 472

Query: 493 VSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQ 552
           +  IN+ N  +A+A+E+Q+ V+++++RN+ N+  L  Q+ +G  Q++ A++ELS LA   
Sbjct: 473 IHQINERNLVIASASEEQAQVSREVDRNLVNIRDLATQSASGAKQTSDATHELSRLAVGL 532

Query: 553 KAQLSFF 559
            A ++ F
Sbjct: 533 NAMVARF 539