Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  241 bits (615), Expect = 5e-68
 Identities = 178/556 (32%), Positives = 286/556 (51%), Gaps = 40/556 (7%)

Query: 7   FAWMRALRLK-RLSMPFSLKNLSIRLQVLLPVLFTMIALVIALWITKVNLTHEQQAIADN 65
           F W+  +R+  +LS+ F L            VL   + L    W     LT     I   
Sbjct: 2   FDWISNIRVSAKLSLGFGL------------VLGLALLLASTGWYAVATLTDRGVKI--- 46

Query: 66  THALVRYKDTIAQIDDTIYPLRISAVYAIYDAERRNNFIAELREGLTEVQSALSSIEQDA 125
                   + IAQI D    LRIS +     A  + N    L++ L  + + L SI    
Sbjct: 47  --------EKIAQISDYTKDLRISRLRL--GANPQPNAYQPLQKILDNLAAHLQSIRDHF 96

Query: 126 QFSRDVPVVKQSIEIYVAESQKMVALFNRLDQGLATREEANVFIQSFRETGNRMISAIND 185
               D  +++Q     V E  +++     LD      ++ +++ +   + G+ ++    D
Sbjct: 97  TSPIDQELIQQQ-NTSVREYGQLL-----LDLAKPNADQVSIY-KRMGQLGDLLL----D 145

Query: 186 LSQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVM 245
            +QK+        +  A S  V++    +     L+L  LAAW+++ QIV P+      +
Sbjct: 146 TTQKLIDSQNAKRDADAASAKVLLG---LVAAMTLLLGALAAWIITQQIVNPLQYTLQAV 202

Query: 246 RKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMT 305
            ++A+GDLS     +  +E+ +L   +   +  L+  +E +     +VASA+ +L+AV  
Sbjct: 203 NRIARGDLSEPVQVNRRDELGQLQSGLQQMMLNLHELIEGIRSGVIQVASAAEQLSAVTE 262

Query: 306 QAESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQ 365
           Q  +    +  E + VA+A++E+ +T  NV+ +A  A   A  AD+ A  G  I  E+  
Sbjct: 263 QTNAGVNNQKTETDHVATAMSEMTATVQNVARDAEEASTAASAADQQASEGEQIVNEAIA 322

Query: 366 ASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRG 425
             +++A  LN +A  V  L+EQSE+I  V++VI+ V+ QTNLLALNAAIEAARAGE+GRG
Sbjct: 323 QIKRLAEELNQSADAVRHLQEQSEKIGGVLDVIKAVAQQTNLLALNAAIEAARAGEAGRG 382

Query: 426 FAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDA 485
           FAVVADEVR LA RTQ ST+EI++++  +Q+ +      M++S  +   +   T +A  A
Sbjct: 383 FAVVADEVRSLALRTQRSTEEIESLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIA 442

Query: 486 LIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNEL 545
           L  IT  VS I   N Q+ATAAEQQS V ++INR+V N+  +  Q  +   ++AS+S EL
Sbjct: 443 LENITSKVSIIQAMNQQIATAAEQQSAVAEEINRSVINVRDISEQTASTCEETASSSTEL 502

Query: 546 SHLAEKQKAQLSFFKL 561
           + L  + +  +  FK+
Sbjct: 503 ARLGHELERLVGRFKV 518