Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  236 bits (602), Expect = 2e-66
 Identities = 134/350 (38%), Positives = 218/350 (62%), Gaps = 2/350 (0%)

Query: 214 ITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQG--DLSVKADADGENEIAKLSQD 271
           I  L +  + +L  WL+   I  P+  + +++  +AQG  DL+ +  +D  +E+  +++ 
Sbjct: 363 IVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARG 422

Query: 272 VNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELAST 331
            NT +++L   + Q+    + V+ +S   A +  +       ++ EI+QVA+AV+E+ +T
Sbjct: 423 FNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTAT 482

Query: 332 ADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQI 391
           A +V+ NA+ A   A  AD+ A  G+ I +++S +   +A+ +  A  VV  L + SE I
Sbjct: 483 AQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENI 542

Query: 392 SNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAII 451
           + ++  IRG+++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ +T+EIQ +I
Sbjct: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMI 602

Query: 452 EELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQS 511
           ++LQ  +      M+ S     ++    AKA  AL  IT++VS IND N Q+A+AAE+QS
Sbjct: 603 QQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQS 662

Query: 512 HVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
            V  DINRNV N+  + ++  +G  +S++AS  L+ LAE+Q+  ++ F++
Sbjct: 663 AVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712



 Score = 39.7 bits (91), Expect = 4e-07
 Identities = 55/309 (17%), Positives = 124/309 (40%), Gaps = 58/309 (18%)

Query: 101 NNFIAELREGLTEVQSALSSIEQDAQFSRDVPVVKQSIEIYVAESQKMVALFNRLDQGLA 160
           N F+++L+  +T+V +++ S+   ++ + D+ +                    R +QG+ 
Sbjct: 424 NTFLSKLQGMITQVVTSVQSVSDSSEHTADIAI--------------------RTNQGVH 463

Query: 161 TREEANVFIQSFRETGNRMISAINDLSQKVNH--YATTSMEQSAQSNAVVMRNAMITV-- 216
            +      I       + M +   D+++       A +  +Q+A     ++R+   ++  
Sbjct: 464 KQMSE---IDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGA 520

Query: 217 LSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQG------DLSVKADADGE-------- 262
           L+V +   +       +    IN++ + +R +A+       + +++A   GE        
Sbjct: 521 LAVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVV 580

Query: 263 -NEIAKLSQDVNTTVTQLYTTVEQL---------------TRISEEVASASTELAAVMTQ 306
            +E+  L+Q       ++ T ++QL               TR  E V  A+    A+ T 
Sbjct: 581 ADEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETI 640

Query: 307 AESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQA 366
            ++ + +  M   Q+ASA  E ++ AD+++ N  +    A E    A    A     ++ 
Sbjct: 641 TQAVSVINDMN-TQIASAAEEQSAVADDINRNVINIGQVANEVASGADESSAASAGLTKL 699

Query: 367 SEQMALALN 375
           +EQ    +N
Sbjct: 700 AEQQRRLIN 708