Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  203 bits (517), Expect = 1e-56
 Identities = 127/349 (36%), Positives = 198/349 (56%), Gaps = 7/349 (2%)

Query: 212 AMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQD 271
           A+  VLSV +  +   W   G     I  L  +  +     L  +   D     A+L   
Sbjct: 177 ALAAVLSVPLGLMGLQWQQRG-----IKRLLRLAEQTTSDPLIARMYTDSRGVQARLEMS 231

Query: 272 VNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELAST 331
           + +   +L T + +L   +E +   + +   +   + S  + + +E EQVA+AVN++A+T
Sbjct: 232 ILSQEARLKTCLTRLQDTAEHLNDQARQSNTLAHNSSSGLERQRVETEQVATAVNQMAAT 291

Query: 332 ADNVSDNAS-SADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQ 390
              V+ +   +ADAT +EA+ L   G  I  E+ +A E++++ + +  + V +L + S++
Sbjct: 292 TQEVASHVQRTADAT-QEANRLTSRGRDIAGETREAIERLSVVVGETGQTVTQLAKDSDE 350

Query: 391 ISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAI 450
           I  V++VI+G++DQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  ST +I A+
Sbjct: 351 IGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHAL 410

Query: 451 IEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQ 510
           I +LQ  +T A  +M        +  A   +A++AL+GI+E+V+ I D   Q+A A E+Q
Sbjct: 411 IAKLQQTATNAVQTMDAGHRQAEEGVARVMEADEALVGISEAVAHITDMTTQIAAATEEQ 470

Query: 511 SHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFF 559
           S V ++I+RN+SN+S L  Q       SA  S EL+  A  Q + +  F
Sbjct: 471 SSVAEEISRNISNISELADQTSGQAHSSALLSEELTRTANTQYSLVERF 519