Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  233 bits (594), Expect = 2e-65
 Identities = 134/367 (36%), Positives = 219/367 (59%), Gaps = 5/367 (1%)

Query: 197 SMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQG--DLS 254
           ++ + ++SN   M   ++  + +    +LA WL+S +I  P+  +  ++  ++QG  DL+
Sbjct: 346 ALGEESRSNLAAM---LVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLT 402

Query: 255 VKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQME 314
            + + D  NE+ +++   N  + +L   + ++    ++V+ AS   A +  + +   Q +
Sbjct: 403 QRLNIDSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQ 462

Query: 315 LMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALAL 374
           L EIE VA+AV+E+ +TA +V+ NA+ A   A  AD  A  G  I +++     ++A  +
Sbjct: 463 LAEIELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEI 522

Query: 375 NDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVR 434
             A  VV  L   SE I  ++  IR +++QTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 523 GRAVDVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 582

Query: 435 MLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVS 494
            LA +TQ +T EIQ +I++LQ  +      M+ S +   ++      A +AL  IT++VS
Sbjct: 583 NLAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVS 642

Query: 495 DINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKA 554
            IND N Q+A+AAE+QS V +DINRNV+N+  +  Q   G  +++ AS  L+ LAE+Q+ 
Sbjct: 643 LINDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRR 702

Query: 555 QLSFFKL 561
            ++ F++
Sbjct: 703 LINQFRV 709