Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  210 bits (535), Expect = 1e-58
 Identities = 139/415 (33%), Positives = 223/415 (53%), Gaps = 22/415 (5%)

Query: 169 IQSFRETGNRMISAINDLSQKVNHYATTSME-QSAQSNAV----------------VMRN 211
           I+  +++G R+++ IN +    ++  T  +       NAV                V RN
Sbjct: 125 IEVNKQSGGRVLTVINPILAHADYRGTNCLTCHQVAENAVMGAVRISYDLKALDQEVDRN 184

Query: 212 AMITVLSVLMLSVLAAWLLSGQ----IVAPINSLQSVMRKLAQG-DLSVKADADGENEIA 266
            MI+    L+L V+   ++       I+  IN+++  M  +A+  DLS       ++EI 
Sbjct: 185 IMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDEDLSRSVAIGAKDEIG 244

Query: 267 KLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVN 326
            +    N  + +   ++E +  ++ ++   S  ++ V  +  +    +  E + VASA+N
Sbjct: 245 AMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMN 304

Query: 327 ELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKE 386
           E+++T   V+ NA+     +  AD  +K+G+ +  E+    E +   +  AA+V+ R++ 
Sbjct: 305 EMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVES 364

Query: 387 QSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKE 446
            S  I  V+ VI G+++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ ST+E
Sbjct: 365 DSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEE 424

Query: 447 IQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATA 506
           IQA+IE+LQ+    A  +M+ +            KA  +L  I   V  IN+ N Q+ATA
Sbjct: 425 IQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATA 484

Query: 507 AEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           AEQQS V ++INRN+S +S +     T  +Q++  S+EL  LA +    +  FKL
Sbjct: 485 AEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539