Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  213 bits (542), Expect = 2e-59
 Identities = 140/400 (35%), Positives = 224/400 (56%), Gaps = 23/400 (5%)

Query: 168 FIQSFRETGNRMISAI--NDLSQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLMLSVL 225
           ++Q F+  G  + S I  +D+ Q+  +Y T              R ++I +L   +++VL
Sbjct: 162 YVQLFKPWGWIIGSGIYVDDVEQEFWNYLT--------------RFSLIGLLISAIMAVL 207

Query: 226 AAWLLSGQIVAPINSLQSVMRKLAQG--DLSVKADADGENEIAKLSQDVNTTVTQLYTTV 283
            A L+   IV P+    + M  +A G  DL+   D  G +E+  L +D N    +L T V
Sbjct: 208 VAILIRS-IVRPLRHTMAAMANIASGEADLTRTLDVSGNDELTTLGRDFNRFTQKLRTVV 266

Query: 284 EQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSAD 343
            QL   +  +  +S  L+ +  QA   +Q +++++EQVA+A+NE+      V+ NA  A 
Sbjct: 267 GQLFETAGALDQSSRSLSQLSGQAHEQSQQQMLQMEQVATAINEVTYAVQEVAKNAEHAS 326

Query: 344 ATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSD 403
           +    A+  A  G    + S Q  ++++  +  A  V+  L +++ +I +V+EVI  +++
Sbjct: 327 SEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADETTKIGSVLEVIGSIAE 386

Query: 404 QTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMAND 463
           QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ ST EI  +IE LQ  S  A +
Sbjct: 387 QTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEIHGMIERLQKNSGAAVN 446

Query: 464 SMQTS--LDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNV 521
            +  S     LT  +A  ++A ++L  I +++ +++  NA +A+A  QQSHV +DIN+NV
Sbjct: 447 VIMESNRASQLTVEQA--SQAGESLGEIAQALRNLSGLNASIASATLQQSHVVEDINQNV 504

Query: 522 SNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           +  + L  ++     QS+ A  +L  LA +    LS F++
Sbjct: 505 TQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFRV 544