Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  222 bits (566), Expect = 3e-62
 Identities = 130/359 (36%), Positives = 211/359 (58%), Gaps = 3/359 (0%)

Query: 206 AVVMRNAMITV---LSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGE 262
           A+  RN ++ +   L++L+   L A +L   I  P+  L+     +A GDLS      G+
Sbjct: 181 ALYERNRVLNIGLLLALLIGGGLFAMVLLRSISRPLEELKQAAASVAAGDLSRTIACRGK 240

Query: 263 NEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVA 322
           +EI ++ Q +      L  T++ +   + ++ASA+ EL AV          +  E++  A
Sbjct: 241 DEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAA 300

Query: 323 SAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVL 382
           +AV E+++  D V+ NA+     +R+A+ +A  G      + Q  +Q++  L   A  V 
Sbjct: 301 TAVTEMSAAVDEVAGNANRTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVT 360

Query: 383 RLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQA 442
           RL E++  I  V++VIR ++DQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ+
Sbjct: 361 RLAEEAASIGQVVDVIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQS 420

Query: 443 STKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQ 502
           ST+EI+ +I  +Q+ +  +   MQ S +  T+++ +  +A+ AL  I E V  IN+ N  
Sbjct: 421 STQEIERMIGAIQSATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLV 480

Query: 503 VATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           +A+AAE+Q+ V ++++RN+  +  +  Q+ TG  Q++ AS+EL+ LA      +  F+L
Sbjct: 481 IASAAEEQAQVAREVDRNLVAIRDISEQSATGAQQTSVASDELARLATHLNQLVGRFRL 539