Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (550), Expect = 2e-60
 Identities = 133/394 (33%), Positives = 223/394 (56%), Gaps = 4/394 (1%)

Query: 170 QSFRETGNRMISAINDLSQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLM--LSVLAA 227
           Q+    GN ++S +     ++        E + + +A+V++  ++  + V+M  L + A 
Sbjct: 283 QALSARGNVVVSGLYKAQDEIQ--TALQNELNTRYDALVLQREVVIAMCVIMGLLLLYAF 340

Query: 228 WLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLT 287
             +   +   I+SL  V R+L +GDLS +     ++E+A ++  +N       +++  + 
Sbjct: 341 CSIYRALRLTIDSLLGVTRRLGEGDLSARVAVVSKDEVADIANGLNLMADAFASSISHMD 400

Query: 288 RISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAR 347
           R S E+   ++ L A +  A+ +   +  E EQVA+A+NE+ ++  +V+ N   A   A 
Sbjct: 401 RTSYELTDVASRLGASIGLAKQSMNAQQAETEQVATAINEMTASVADVAQNTEGAALAAD 460

Query: 348 EADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNL 407
           EA+  +++GL I  ++    + +A  +  +A+ V  L   S+ I  VI+VI  ++DQTNL
Sbjct: 461 EANTASRNGLRIMHQAHSTIQALAEEVELSAQKVQALALHSQSIGGVIQVISTIADQTNL 520

Query: 408 LALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQT 467
           LALNAAIEAARAGE GRGFAVVADEVR LA+RTQAST+EI+ II++LQ+ +  A   MQ 
Sbjct: 521 LALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTEEIRGIIQQLQSATDAAVQQMQA 580

Query: 468 SLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTL 527
                    +  + A+ +L  I++ V  I + N Q+A+AA QQ  V++DINRNV  +   
Sbjct: 581 GQQKAHACISAASDASGSLSSISQGVERIVEMNTQIASAAVQQHAVSEDINRNVMEIRNS 640

Query: 528 VHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
               + GI  +A  ++EL+ +A   +  ++ FKL
Sbjct: 641 SGTLMLGIDNNAVTADELARVASDMRNVVARFKL 674