Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  202 bits (513), Expect = 3e-56
 Identities = 111/300 (37%), Positives = 183/300 (61%)

Query: 260 DGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIE 319
           D     A+L   + +   ++ T + +L   +E + S + +  ++   +    + + +E E
Sbjct: 220 DSRGPQARLEMSILSQEARMKTCLTRLQDTAEHLNSQARQSNSLANASSIGLERQRVETE 279

Query: 320 QVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAAR 379
           QVA+A+N++A+T   V+ + + A    ++A+EL + G  I  E+ +A ++++ ++ +   
Sbjct: 280 QVAAAINQMAATTQEVASHVNRAADATQQANELTRRGRDIAGETREAIQRLSTSVGETGL 339

Query: 380 VVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAAR 439
            V RL + S++I  V++VI+G++DQTNLLALNAAIEAARAGE GRGFAVVADEVR LA R
Sbjct: 340 TVTRLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQR 399

Query: 440 TQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDS 499
           T  ST +I  +I +LQ  +T A  +M T      +  A   +A+ AL+GI+E+V++I D 
Sbjct: 400 TAESTGQIHGLIAKLQQTATDAVHTMDTGRRQAEEGVARVLEADQALVGISEAVANITDM 459

Query: 500 NAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFF 559
             Q+ATA E+QS V ++INRN++ +++L  Q      +SA  S EL+  A  Q + +  F
Sbjct: 460 TTQIATATEEQSAVAEEINRNIATIASLADQTSDEARRSAVLSGELTDTANSQYSLVERF 519