Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  218 bits (556), Expect = 4e-61
 Identities = 139/421 (33%), Positives = 236/421 (56%), Gaps = 4/421 (0%)

Query: 141 YVAESQKMVALFNRLDQGLATREEANVFIQSFRETGNRMISAINDLSQKVNHYATTSMEQ 200
           Y++ SQ++V L    +   A  +  ++  +SF +  + M   I+  ++++   A  + + 
Sbjct: 154 YISGSQQVVDLMKAGNYEAARTQLNSLSSESFTKVRSYMRVMIDSNNRQIKEGAAAAADL 213

Query: 201 SAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADAD 260
            A S  ++    +I  L  +ML VL   +++  +   + S Q    ++A GDL+    + 
Sbjct: 214 KASSVLMLEIGVVIAFLVAIMLGVLITRMITRPLAVAVASAQ----RIAGGDLTQPIVST 269

Query: 261 GENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQ 320
             +E  +L   ++     L  T++Q+   S+++ASA+ EL+AV  ++      +  EI+Q
Sbjct: 270 SGDEAGQLLNALSDMQGGLKNTIQQIASASDQLASAAEELSAVTDESTRGLTRQNDEIQQ 329

Query: 321 VASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARV 380
            A+AVN++ +  + V+ NA S    ++ A + A  G      + +    M   +  +   
Sbjct: 330 AATAVNQMTAAVEEVARNAVSTSEASKSATDDAVDGRGQVDHTVKGITTMVHEITASTGA 389

Query: 381 VLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAART 440
           V  L     +IS V++VIR +++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT
Sbjct: 390 VSELAGHVREISKVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRT 449

Query: 441 QASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSN 500
           QAST EI+ +I  +Q+ +  A  +M  SL + T  + L  +A  AL  IT  V+ IN+ N
Sbjct: 450 QASTVEIEGMISTVQSGADGAVAAMGKSLSLATNTQELALRAGAALEKITLGVATINERN 509

Query: 501 AQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFK 560
             +A+A+E+Q+ V ++++RN+ N+  L  Q+  G +Q++++S ELS LA    + ++ FK
Sbjct: 510 LVIASASEEQAQVAREVDRNLINIQDLSTQSAAGANQTSASSQELSRLATSFNSLVANFK 569

Query: 561 L 561
           L
Sbjct: 570 L 570