Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (550), Expect = 2e-60
 Identities = 135/377 (35%), Positives = 212/377 (56%), Gaps = 8/377 (2%)

Query: 174 ETGNRMISAINDL-SQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSG 232
           ETG + +  +ND  ++K    A  + +Q+     + +   +IT L       L AW+ + 
Sbjct: 161 ETGLKKLIGVNDAKAEKAGAAANAAYQQTLWMVGIFITVGVITTL-------LLAWMYTR 213

Query: 233 QIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEE 292
            +  PI    S+ +++A  DLS      G +E AKL   + T  + L   +  +   S +
Sbjct: 214 SLTGPIGDSLSIAQRIATNDLSQDIPQHGTDEAAKLIAALATMQSNLRNALTLIGDSSTQ 273

Query: 293 VASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADEL 352
           +A+ S E+ AV   A      +  EIE  A+AVNE+++  + V+ NA+SA     ++   
Sbjct: 274 LAATSEEMHAVTEDASRTILRQTNEIEMAATAVNEMSAAVEEVASNAASASEVTSQSSTA 333

Query: 353 AKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNA 412
           A +G A   E+  A   M   +   +  V  L   +  IS V++VIR +++QTNLLALNA
Sbjct: 334 AMAGRAQVDETVTAINLMVSKVQITSTEVQGLAVMATDISKVLDVIRAIAEQTNLLALNA 393

Query: 413 AIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDML 472
           AIEAARAGE+GRGFAVVADEVR LA RTQ ST+EI+ +++ +QT +  A  +M+ +    
Sbjct: 394 AIEAARAGEAGRGFAVVADEVRALAHRTQQSTREIEQMVDSIQTGTGNAVSAMEQTSVQA 453

Query: 473 TQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNV 532
            +   +   A  AL+ ITES+S IN+ N  +ATAAE+Q+ V ++++R++ ++  L  Q  
Sbjct: 454 HKTLEMANGAGKALLEITESISQINERNLMIATAAEEQAQVAREVDRSLVSIRDLSSQTS 513

Query: 533 TGISQSASASNELSHLA 549
            G +Q+A A+ ELS LA
Sbjct: 514 EGSNQTAIATAELSTLA 530