Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  221 bits (562), Expect = 7e-62
 Identities = 129/349 (36%), Positives = 207/349 (59%), Gaps = 1/349 (0%)

Query: 213 MITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDV 272
           +  V++ L    LA WL +  IV P+    +   ++A GDL+   + DGE+E+ +L + +
Sbjct: 194 IFVVIAALCTIGLALWL-TRSIVGPLQRAVTAAEQVANGDLTHTIEVDGEDEVTRLLRAL 252

Query: 273 NTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTA 332
                 L   +  +   + ++ASA+TEL +V   +      +  EI+Q A+A+NE+ S  
Sbjct: 253 AMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATAINEMTSAV 312

Query: 333 DNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQIS 392
           + V+ NA S    + ++   A +G     E+ Q+ + +   +   + +V  L  QS+ I 
Sbjct: 313 EEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATSTLVQNLANQSQDIG 372

Query: 393 NVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIE 452
            V++VIR +++QTNLLALNAAIEAARAGESGRGFAVVADEVR LA RTQ ST EI +++ 
Sbjct: 373 KVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDSMVS 432

Query: 453 ELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSH 512
            +++ S  A DSM TS        AL   A ++L  IT S++ I++ N  +A+AAE+Q+ 
Sbjct: 433 AMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVIASAAEEQAQ 492

Query: 513 VTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           V+++++RN+ N+  L  Q+  G +Q +++S+ELS LA      +S FK+
Sbjct: 493 VSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRFKV 541