Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  234 bits (596), Expect = 1e-65
 Identities = 129/343 (37%), Positives = 209/343 (60%)

Query: 219 VLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQ 278
           VL+L + AA L++ QI  P++S     R++A GDL+       ++E+  L   +      
Sbjct: 300 VLLLGIFAAILITRQITRPLDSTVIAARRIADGDLTNDLSTTRQDELGLLQNTMQHMTVS 359

Query: 279 LYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDN 338
           L T +  ++    ++A+A+ EL+AV  Q  +    + +E++QVA+A+N++AST   V+ N
Sbjct: 360 LRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMNQMASTVQEVAQN 419

Query: 339 ASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVI 398
              A   AR+A + A  G ++ + +++   Q+A  +      + RL + S++I  VI+VI
Sbjct: 420 TEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRLIQDSDKIGGVIDVI 479

Query: 399 RGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQS 458
           + V++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+ST EI+A+I+ LQ  +
Sbjct: 480 KAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSSTTEIEALIKSLQDGT 539

Query: 459 TMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDIN 518
             A++ M  S        AL  +A ++L+ IT S+  I   + Q++ AAE+QS VT +IN
Sbjct: 540 GAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQISAAAEEQSAVTDEIN 599

Query: 519 RNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           R+V ++  +  Q+ T   QSA+++ EL+ L    +  ++ F++
Sbjct: 600 RSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642