Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  214 bits (545), Expect = 7e-60
 Identities = 131/359 (36%), Positives = 205/359 (57%), Gaps = 2/359 (0%)

Query: 203 QSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGE 262
           QS +V M  A I +  V+  +++   L++  I  P+ S   V +++A GDL+    +   
Sbjct: 186 QSTSVFMLTAGIVIAFVV--AIMLGILITRMITRPLRSAIEVAQRIASGDLTQSVSSTRG 243

Query: 263 NEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVA 322
           +E   L   + T    L  T+++++  S+++ASA+ EL AV  ++      +  EI+Q A
Sbjct: 244 DEAGHLLNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEESTRGLTRQNDEIQQAA 303

Query: 323 SAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVL 382
           +AVNE+ +  + V+ NA S    ++     A +G      + +    M   + ++   V 
Sbjct: 304 TAVNEMTAAVEEVARNAVSTSEESKSLATDAANGRGQVDNTVKGIGTMVSEITESTGSVT 363

Query: 383 RLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQA 442
            L      IS V+EVIR +++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQA
Sbjct: 364 TLAGHVRDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQA 423

Query: 443 STKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQ 502
           ST EI+ +I  +Q+ +  A  +M  SL   T  + L  +A  AL  IT  V  IN+ N  
Sbjct: 424 STVEIEGMIGTVQSGADGAVAAMSKSLATATNTQELAQRAGSALEKITSGVGMINERNMV 483

Query: 503 VATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           +A+A+E+Q+ V ++++RN+ N+  L  Q+  G +Q++++S ELS LA      ++ FKL
Sbjct: 484 IASASEEQAQVAREVDRNLVNIQELSAQSAAGANQTSASSQELSRLATSFNTMVAQFKL 542