Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  215 bits (548), Expect = 4e-60
 Identities = 143/501 (28%), Positives = 256/501 (51%), Gaps = 19/501 (3%)

Query: 61  AIADNTHALVRYKDTIAQIDDTIYPLRISAVYAIYDAERRNNFIAELREGLTEVQSALSS 120
           A+A +       +D I Q       +R       Y  +  N   AE     T + + +  
Sbjct: 138 AVARSDDGTPAQRDAIVQAMTLFQKMRFDLRGYTYSLKAENRAPAE-----TSMNTVIEF 192

Query: 121 IEQDAQFSRDVPVVKQSIEIYVAESQKMVALFNRLDQGLATREEANVFIQSFRETGNRMI 180
           +     F     ++K  ++        M++  N L+Q  A +   ++      +    + 
Sbjct: 193 VRNLQGFDGQSAIIKHLVD-------SMISYQNTLNQFTAAQARIDLAQAGITKDIGILF 245

Query: 181 SAINDLSQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINS 240
              + LS+   +     +E  +Q+  ++     + +++ L++S LAAW+++  IV P+  
Sbjct: 246 ECADKLSE---NQVNLRVEDVSQAKMLLS----VWLIAALIMSALAAWVITNLIVGPLRD 298

Query: 241 LQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTEL 300
              +  ++A GDL+       ++E+ +L   +      L   +  L     ++ASA+ +L
Sbjct: 299 TLKLAERVADGDLTHNQVVTRKDELGQLQGSMMRMTGNLRELIGGLRDGVTQIASAAEQL 358

Query: 301 AAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIF 360
           +AV  Q  +    +  E +QVA+A++E+++T   V+ NA  A   A  A + A+ G  + 
Sbjct: 359 SAVTEQTSAGVNSQKNETDQVATAMHEMSATVQEVARNAEQASHAAVNASKEAREGDGVV 418

Query: 361 KESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAG 420
            ++    E++A  +  +   +  LK +S +I  V++VI+ V++QTNLLALNAAIEAARAG
Sbjct: 419 SKAVAQIEKLATEVTHSKSAMDDLKNESNKIGGVLDVIKAVAEQTNLLALNAAIEAARAG 478

Query: 421 ESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTA 480
           E+GRGFAVVADEVR LA RTQ ST+EI A+I  L T++      +  S  +   +  LT 
Sbjct: 479 EAGRGFAVVADEVRSLAQRTQTSTEEIAALISGLHTRTAQVATILDNSQALTANSVELTR 538

Query: 481 KANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSAS 540
            A  ++  +T+++S I   N Q+A AAE+QS V ++INR+V N+  +  Q  +   ++A+
Sbjct: 539 NAGVSINNMTQAISTIETMNHQIAAAAEEQSAVAEEINRSVLNVRDISEQTASASEETAA 598

Query: 541 ASNELSHLAEKQKAQLSFFKL 561
           +S EL+ L    ++ +S F++
Sbjct: 599 SSVELARLGVHLQSLVSRFRV 619