Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  221 bits (564), Expect = 4e-62
 Identities = 146/426 (34%), Positives = 236/426 (55%), Gaps = 11/426 (2%)

Query: 143 AESQKMVALFNRLDQGLATREEANVFIQSFRETGNRMISAINDLSQKVNHYATTSMEQ-- 200
           A +QK  +L + + + +  ++ AN    +F +T   ++    +L   ++     +++Q  
Sbjct: 118 ASAQKFASLLDTVLELI--QKGANADAVTFTDTN--IVPVTGELQTAIDALVQMNIDQAD 173

Query: 201 --SAQSNAVVMRNAMITVLSV---LMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSV 255
             S ++ A      M TV+ +   L++++  A LL+  IV P+ SL SV  ++A GDL  
Sbjct: 174 QLSVRAEAAYESGFMFTVVIIIVSLIITIFLAILLTRSIVTPLKSLLSVNERIASGDLRG 233

Query: 256 KADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMEL 315
                G++E ++L +        L  T+  +   S+++ASA+ E+  +  Q+ +    + 
Sbjct: 234 DIPVTGDDEFSELQRATLAMQKNLRQTIGLIGNSSQQLASAAEEMNCITVQSSTGLGRQN 293

Query: 316 MEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALN 375
            EIEQ A+AVNE+ +  D V+ NA++A   A+E++     G      +  A E+++  + 
Sbjct: 294 QEIEQAATAVNEMTAAVDEVARNAAAASDAAKESNASTVRGAERVASTVTAIEKLSATVL 353

Query: 376 DAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRM 435
             +  V RL  QS  IS V+ VIR +++QTNLLALNAAIEAARAGE GRGFAVVADEVR 
Sbjct: 354 ATSADVQRLAGQSNDISKVLAVIRTIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRA 413

Query: 436 LAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSD 495
           LA RTQ ST+EI+ +I  +   S  A  SMQ S         +  +A  AL  I   + +
Sbjct: 414 LAHRTQQSTQEIEQMIGAVLEGSEQATRSMQESCMGAQDTLGVAHEAGAALDDIARRIEE 473

Query: 496 INDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQ 555
           IND N  +ATA+E+Q+ V + I+ N+ ++  L  Q+  G +Q++ AS ELS LA +    
Sbjct: 474 INDMNTLIATASEEQAQVARSIDHNLISIRDLSVQSTEGANQTSLASGELSRLAIEMNGV 533

Query: 556 LSFFKL 561
           ++ FK+
Sbjct: 534 VTRFKM 539