Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  240 bits (613), Expect = 1e-67
 Identities = 159/492 (32%), Positives = 260/492 (52%), Gaps = 14/492 (2%)

Query: 79  IDDTIYPLRISAVYAIYDAERRNNFIAELREGLTEVQSALSSIEQDAQFSRDVPVVKQSI 138
           IDDT+     + +  +  A    N +   R       S  ++  + A +     ++ Q  
Sbjct: 195 IDDTLRAPNETGIRQVKIAGDLRNGMTNFRLVFRRYLSVPNADNRQATYKAADALIAQ-- 252

Query: 139 EIYVAESQKMVALFNRLDQGLATREEANVFIQSFRETGNRMISAINDLSQKVNHYATTSM 198
            +  A SQ  V     +D  L   ++  V + S  +   +     NDL Q+    A  + 
Sbjct: 253 -VDAARSQLPVEANAAVDAALVALKQYKVLMTSISDMLQQTEQIRNDLQQQSVATAARAD 311

Query: 199 EQSA---------QSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLA 249
           + +A         Q  AVV    +   L VL++ + AA+L++ QI  P+NS     R++A
Sbjct: 312 DLAALQVISAKKEQQTAVVQ--LLSVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIA 369

Query: 250 QGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAES 309
            GDL+  +    ++E+  L   +      L   +  +     ++A+A+ +L+AV  Q  +
Sbjct: 370 DGDLTHDSSTTRQDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSA 429

Query: 310 NAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQ 369
              ++  E++QVA+A+NE+AST   V+ N   A   A++A E A  G ++ + +++   Q
Sbjct: 430 GVTLQKNEVDQVATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQ 489

Query: 370 MALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVV 429
           +A  +      + RL E S +I +VI+VI+ V++QTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 490 LAGEVQQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVV 549

Query: 430 ADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGI 489
           ADEVR LA RTQ ST EI+A+I+ LQ  +  A+  M  SL        L  +A  AL+ I
Sbjct: 550 ADEVRSLAQRTQNSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEI 609

Query: 490 TESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLA 549
            +S+  I   + Q++ AAEQQS VT++INR+V ++  +  Q+ +   QSA+++ EL+ L 
Sbjct: 610 NQSIGTIEQMSQQISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLG 669

Query: 550 EKQKAQLSFFKL 561
              ++ ++ FK+
Sbjct: 670 SDLQSMVARFKI 681