Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  246 bits (629), Expect = 1e-69
 Identities = 154/492 (31%), Positives = 272/492 (55%), Gaps = 15/492 (3%)

Query: 77  AQIDDTIYPLRISAVYAIYDAERRNNFIAE-------LREGLTEVQSALSSIEQDAQFSR 129
           A ++ T+  +R+    A+ D +     I +       +++ +   ++ ++S ++   F  
Sbjct: 56  AMMNSTVLRVRLETQRAVADPQTVQQTIVKFPAYRKAMKDAVYNYETLIASDQERQLFL- 114

Query: 130 DVPVVKQSIEIYVAESQKMVALFNRLDQGLATREEANVFIQSFRETGNRMISAINDLSQK 189
               VK+S + Y ++   +  L    D    T     +     R   N+M + + +L+Q 
Sbjct: 115 ---AVKKSYDDYASQLDLLEPLLKAGD----TASIVKLVATGIRPLTNQMETQVEELTQF 167

Query: 190 VNHYATTSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLA 249
            N  A  +  Q+ Q     +   +  ++ V +L++  A LL+  I +PI S  SV  ++A
Sbjct: 168 NNKGAALAGVQATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIA 227

Query: 250 QGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAES 309
             DL+ + +  G +E  +L   + T    L +T+ Q+   S ++A+AS E+ AV  Q+  
Sbjct: 228 SSDLTKEVEVSGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSL 287

Query: 310 NAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQ 369
               +  E+ Q A+AV E+++  D V+ NA SA   +R+     + GL    ++ ++ E+
Sbjct: 288 GLVSQNDEVNQAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEK 347

Query: 370 MALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVV 429
           ++  + D +  +  L  +++ IS V+EVIR +++QTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 348 LSSNVRDTSEQITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVV 407

Query: 430 ADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGI 489
           ADEVR LA RTQ ST+EI+ +I+ +Q  S  A  +M TS ++  ++ ++   A+ +L  I
Sbjct: 408 ADEVRALAHRTQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQI 467

Query: 490 TESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLA 549
             +++ IN+ N  +ATA+E+Q+HV ++++RN+ ++  L  Q+  G SQ+ASA NE+S LA
Sbjct: 468 ATAITGINERNILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLA 527

Query: 550 EKQKAQLSFFKL 561
                 ++ FK+
Sbjct: 528 VSLNQLVNRFKV 539