Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (558), Expect = 3e-61
 Identities = 128/400 (32%), Positives = 228/400 (57%), Gaps = 7/400 (1%)

Query: 169 IQSFRETGNRMISAINDLSQKVNHYATTS-------MEQSAQSNAVVMRNAMITVLSVLM 221
           +Q+F+     ++ A  +++ +       S       +++  Q +A      +   L  ++
Sbjct: 241 LQNFKAATGTIVQARKEMTTQGQDIVKISEDMYKLQLDRRDQESAQARTTQITCTLLAII 300

Query: 222 LSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYT 281
           L ++AA +++ QI  P+    +V+ ++A GDL+        +E+  L Q +    T L  
Sbjct: 301 LGIIAAVIITRQITRPLRETLAVVDRIASGDLTQTLAVTRSDELGVLQQGIQRMGTTLRE 360

Query: 282 TVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASS 341
            +  +     ++ASA+ EL+AV  Q  +    + +E +QVA+A++E+++T   V+ NA  
Sbjct: 361 LIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQ 420

Query: 342 ADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGV 401
           A   A  AD  A+ G  +  E+    E++A  +  +   +  L+++S++I  V++VI+ V
Sbjct: 421 ASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVMDVIKAV 480

Query: 402 SDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMA 461
           ++QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST EI+ ++  LQ+ +   
Sbjct: 481 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQSGTRQV 540

Query: 462 NDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNV 521
           +  M  S ++   +  L+ +A  +L  IT++VS I   N Q+A AAE+QS V ++I+R++
Sbjct: 541 SSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEISRSI 600

Query: 522 SNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
            N+  +  Q  +   ++A++S EL+ L  + +  +S F++
Sbjct: 601 VNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRFRI 640