Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (558), Expect = 2e-61
 Identities = 143/459 (31%), Positives = 247/459 (53%), Gaps = 14/459 (3%)

Query: 106 ELREGLTEVQSALSS-IEQDAQFSRDVPVVKQSIEIYVAESQKMVALF--NRLDQGLATR 162
           E+ +G +E  + + S  E D+     +  ++ + + ++   Q  +AL   N+LD+    R
Sbjct: 111 EVEKGFSEYLARVQSGTEHDS-----IVALQDAYKAFMPGLQDQIALIEQNKLDEA---R 162

Query: 163 EEANVFIQSFRETGNRMISAINDLSQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLML 222
             AN  +    +  +  +  + +L+ +    A  +   S +   ++   A+  +  VL+L
Sbjct: 163 TLANTVLSLQGDLMDMQVQLLRELNTQSAAAAVEAAGASYEQTRII---ALSAIGLVLVL 219

Query: 223 SVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTT 282
           ++L AW LS  I+ P+     +   +A GDLS     DG++E A+L   +    T L++T
Sbjct: 220 TLLLAWRLSVSIIHPVRQALHIASTIADGDLSEHPIPDGKDETAQLLITLGRMRTNLHST 279

Query: 283 VEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSA 342
           ++Q+   + +++ +  E+ ++   +  N Q++  EIEQ A AVN+++  A  V+ NAS+ 
Sbjct: 280 IDQIYAAATQLSQSVQEMGSIAEASALNLQLQNTEIEQAAVAVNQMSQAAIEVAGNASNT 339

Query: 343 DATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVS 402
              +  +   A  G      +  + + +   + D++     L E+++ IS++++VIR ++
Sbjct: 340 VTESEASTRAAAQGQEKLSATILSIKALTENVLDSSHQAEGLAERTQSISSILDVIRAIA 399

Query: 403 DQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMAN 462
           +QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RT AST EI+ +I  +Q  +    
Sbjct: 400 NQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTSASTAEIEGLISGVQQSTQQTA 459

Query: 463 DSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVS 522
            S++ +           A   +AL  I +S + IND N  +A+AAEQQ+ V  +++RN+S
Sbjct: 460 SSLRHTATQANLTMEQAASTGEALQVIIQSTATINDRNLLIASAAEQQAQVATEVDRNLS 519

Query: 523 NMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           ++  L  Q  +G  Q+  ASN LS LA      +  F L
Sbjct: 520 SIRDLSSQTASGAQQTTVASNALSMLATDLNLMVQRFVL 558