Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  232 bits (592), Expect = 3e-65
 Identities = 149/457 (32%), Positives = 247/457 (54%), Gaps = 12/457 (2%)

Query: 105 AELREGLTEVQSALSSIEQDAQFSRDVPVVKQSIEIYVAESQKMVALFNRLDQGLATREE 164
           A+    +  +  AL  I Q AQ   +     +S++     +  + +   RL +    + +
Sbjct: 202 ADESAAIAAIDEALKEIGQIAQDQGN-----ESLQGLTPATAALQSYRERLGEFKQIQTK 256

Query: 165 ANVFIQSFRETGNRMISAINDLSQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLMLSV 224
           A    +     G  ++ ++  L    NH  T   +  A +++ ++ +     L   ++ +
Sbjct: 257 AEADQEIMEGLGETLLDSVGAL----NHLQTAQRDSEAANSSAMLSSVAGLAL---LIGL 309

Query: 225 LAAWLLSGQIVAPINSLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQLYTTVE 284
           LAAW+++ QI  P+    S   ++AQGDLS        +E+ +L   + T    L   V 
Sbjct: 310 LAAWIMTRQITVPLQQTLSAAARIAQGDLSRDISVTRRDEMGQLQGSMQTMTVSLRELVG 369

Query: 285 QLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDNASSADA 344
            ++    ++ASA+ +L+AV  Q       +  E +QVA+A+NE+A+T   V+ NA  A  
Sbjct: 370 GISEGVSQIASAAEQLSAVTKQTCIGVTSQKDETDQVATAMNEMAATVQEVARNAQEASQ 429

Query: 345 TAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQ 404
            A +AD+ A+SG  +  ++    EQ+A  + ++ + +  LK++S +I  V++VI+ VS Q
Sbjct: 430 AAAQADQQARSGDEVVGQAITQIEQLAREVLNSTQSMSALKQESNKIVGVLDVIKSVSQQ 489

Query: 405 TNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDS 464
           TNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST+EI+ +I  LQT +     +
Sbjct: 490 TNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIAALQTGTQQVATT 549

Query: 465 MQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNM 524
           + +S  +      L+ +A  AL  IT +V+ I   N Q+ATA+E+QS V + INRNV ++
Sbjct: 550 LDSSRTLTDNTVELSRRAGGALEQITRTVATIQHMNEQIATASEEQSVVAEQINRNVISV 609

Query: 525 STLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
             +  Q      Q+A++S EL+ L    +  +  F++
Sbjct: 610 RDISEQTAAASEQTAASSVELARLGTHLQTLVGKFRV 646