Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  206 bits (525), Expect = 2e-57
 Identities = 133/434 (30%), Positives = 237/434 (54%), Gaps = 8/434 (1%)

Query: 135 KQSIEIYVAESQKMVALFNRLDQGLATREEANV--FIQSFRETGNRMISAINDLSQKVNH 192
           K  ++++   SQ   A  + L  G  TRE  N   F  +  E     +   +     ++ 
Sbjct: 206 KGDVKLHSDTSQIGKASLSSLYGGNVTRELLNKGDFGLTQTELDGETLLVASSYIPSMDW 265

Query: 193 YATTSMEQSAQSNAVVMRNA-MITVLSVLMLSVLA--AWLLSGQIVAPINSLQSVMRKLA 249
           Y    + + A+  A++  +A  I V +VL+ +     +  +S  +  PI  +  +++ + 
Sbjct: 266 YLVAQVPR-AEVFALLEESAYQILVWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIG 324

Query: 250 QG--DLSVKADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQA 307
           QG  DL  +   +G +E+A+L++  N+ + ++  ++ ++T  S +++ A+ ++A    Q 
Sbjct: 325 QGEGDLRQRLPVEGNDELAQLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQT 384

Query: 308 ESNAQMELMEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQAS 367
           + ++Q++  +   V +A+NE+ +T   ++ NA+ A   A++AD  + +G  +   +    
Sbjct: 385 QDDSQLQKDQTMMVVTAINEMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTI 444

Query: 368 EQMALALNDAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFA 427
            Q++  +     V+  L   +  I ++++VIR VSDQTNLLALNAAIEAARAGE+GRGFA
Sbjct: 445 NQLSQDVEQVGNVIESLATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFA 504

Query: 428 VVADEVRMLAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALI 487
           VVA+EVR LA+RT AST E+Q +I+ LQ+++  A ++M  S     +      +A+  L 
Sbjct: 505 VVAEEVRNLASRTAASTDEVQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLT 564

Query: 488 GITESVSDINDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSH 547
            I++ +  I D N QVA A E+QS V +DINRNV+ +S +  +        A AS  L+ 
Sbjct: 565 EISQQIGAITDMNIQVAAATEEQSTVVEDINRNVTEISEITQRTSETSQAVAQASQSLNQ 624

Query: 548 LAEKQKAQLSFFKL 561
           LA +    ++ FK+
Sbjct: 625 LAHRLDTLVAGFKV 638