Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  223 bits (567), Expect = 2e-62
 Identities = 127/343 (37%), Positives = 208/343 (60%), Gaps = 2/343 (0%)

Query: 221 MLSVLAAWLLSGQIVAPINSLQSVMRKLAQG--DLSVKADADGENEIAKLSQDVNTTVTQ 278
           ++    AW ++  I  PI    + +  +A+G  DL+ + +   ++EIA+L+   N    +
Sbjct: 292 LIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRRIEVKSKDEIAQLALAFNRFAEK 351

Query: 279 LYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDN 338
           ++ TV Q++  +  +A+++ E++A+  + +  A+ + +E EQVA+A+NE+A+T   V+ N
Sbjct: 352 IHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNEMAATVQEVAHN 411

Query: 339 ASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVI 398
           A+ A   A  A E  + G  + ++       +A  +  AA+ +  L+  + QI +V+ VI
Sbjct: 412 ATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERNTAQIDSVLVVI 471

Query: 399 RGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQS 458
           R ++DQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQAST EIQ +IE LQ  +
Sbjct: 472 RNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEIQQMIEALQHSA 531

Query: 459 TMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDIN 518
                +M TS        +L  +A +AL  IT++VS I+  N Q+A+AA +Q  V+ +IN
Sbjct: 532 KSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAANEQCAVSAEIN 591

Query: 519 RNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
           +NV+N++ +         Q+A A +EL+ L+ +    L+ F++
Sbjct: 592 KNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634