Pairwise Alignments

Query, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  223 bits (568), Expect = 2e-62
 Identities = 147/463 (31%), Positives = 261/463 (56%), Gaps = 11/463 (2%)

Query: 106 ELREGLTEVQSALSSIEQDAQFSRDVPVVKQSIEIYVAESQKMVALFNRLDQGL---ATR 162
           EL   L+E ++ L  + + AQ   D   +K   E    +++K++AL    D  +   AT+
Sbjct: 215 ELDYILSETKNKLEYVNRHAQDIIDADTLKSVNE----DTKKVLALLEGPDSMVLLKATQ 270

Query: 163 EEANVFIQSFRETGNRMISAINDLSQKVNHYATTSMEQSAQSNAVVMRNAMITVLSVLML 222
                   +   T  + +  I+   + V++   +     +Q     +  A I  + V+++
Sbjct: 271 LNHAKSAMNQLATIEKDVKVIDRNMEDVSNNIESVAANMSQETIAKIDAASIRTIIVVLI 330

Query: 223 SVLAAWLLSGQIVAPIN----SLQSVMRKLAQGDLSVKADADGENEIAKLSQDVNTTVTQ 278
           +++AA ++S  +VAP+      + + +  LA G+L+ K D  G +E A+L+++ N  V  
Sbjct: 331 AIVAAVIISFAVVAPLKRSLYQVNNALNVLASGNLTHKLDDSGHDEFAELAKNCNRLVDS 390

Query: 279 LYTTVEQLTRISEEVASASTELAAVMTQAESNAQMELMEIEQVASAVNELASTADNVSDN 338
           L   +  +   S ++A+A+ + +A+  Q  S  Q +  +++QVA+A  EL+S+A  VS +
Sbjct: 391 LRGLIVGILDRSNQLAAAAEQTSAITAQTTSGIQEQKSQVDQVATATTELSSSAQQVSMS 450

Query: 339 ASSADATAREADELAKSGLAIFKESSQASEQMALALNDAARVVLRLKEQSEQISNVIEVI 398
           A  A A  ++AD+ AK    I +E+ +    +A  +  A +V+ +++  S  I ++++VI
Sbjct: 451 ADDALAQIKQADQEAKHMRTIAEENKRTILALADEVAKAGQVINKVQSDSASIGSILDVI 510

Query: 399 RGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQASTKEIQAIIEELQTQS 458
           RG+++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ ST+EIQ +IE LQ  +
Sbjct: 511 RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQVSTREIQQMIEVLQQGA 570

Query: 459 TMANDSMQTSLDMLTQNKALTAKANDALIGITESVSDINDSNAQVATAAEQQSHVTQDIN 518
             A  +M             T +AN AL  I++SV    D+   +A AA++Q+ V+Q ++
Sbjct: 571 QQAVAAMDMGRAQANACVDKTEQANLALETISQSVHKAYDAGTHIAHAAQEQNVVSQQVS 630

Query: 519 RNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQLSFFKL 561
             + +++ +  +   G  Q+A +S++++ LAE+ +A +  F++
Sbjct: 631 EKLEHIAAISEETAIGADQTAQSSHQVAKLAEELQASVGEFRV 673