Pairwise Alignments

Query, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Multidrug resistance protein B from Pseudomonas fluorescens FW300-N2E2

 Score =  146 bits (369), Expect = 9e-40
 Identities = 92/345 (26%), Positives = 171/345 (49%), Gaps = 6/345 (1%)

Query: 56  PFLVVFLYQDYHATATEVGAMLATSALVGSLTGLYSGYLSDKFGRKWVMVSGTLIATFAY 115
           P L +FL         +VG +L  +  + +L  LY GY+ D+  ++ +++   L +   +
Sbjct: 16  PLLTLFLSNKLGLNQQDVGLLLGIAVFIATLLALYGGYVIDRLEKRRLLILAMLSSAIGF 75

Query: 116 TGIGLSNQIWQFFIMIVLTGLMRPMIEAPGKAVIGDNLPDEKDRELALNVRYFLLNLGGA 175
             +  +  ++   + +V+T     +     KA++ +NLP  + R  A ++RY L N+G A
Sbjct: 76  ILLTFAENLYLTTMTVVITETASALFLIGSKAILSENLPMGQ-RAKAFSLRYTLTNIGYA 134

Query: 176 IGPLIGITLALAHPQVLFIVTGIAYFLFGLWLLATLERKGRFQQPDRSLLPNFSATLRVI 235
            GP++G+ +A  +P   F++ G   F F ++L+  + R      P     P+F  TL+ +
Sbjct: 135 TGPMLGVVIAGVYPIAPFLIAGGIAF-FSIFLMTGIPRDAALT-PVIGQPPSFLKTLKTL 192

Query: 236 SKDNVFVKMMLANFLMMFVYGQVESSLPQ-VIVRSGIADAAQLVAGLVLVNTMTIILFQF 294
             D   +       L   V+G+    L Q ++V      A  ++A L+  N +T+IL Q+
Sbjct: 193 KNDRTLIMFTCGCLLSTVVHGRFTLYLSQYLLVTHDSKRALDIMAALLACNAVTVILLQY 252

Query: 295 PTLKLLESVPLFTRTRLGMALMGLAQVGFMFTPEAFPLGWYLACFVLSMGEVIAFPTLNV 354
              + L+   L      G +L  L  +GF    +   + W +A F+ ++GE+I +P   +
Sbjct: 253 QIGRFLDREKLRYWIAAGTSLFILGLIGFSLADDM--VSWCVAMFIFTLGEMIIYPAEFL 310

Query: 355 QIDRLAPAHLRGSYFGAAALYSLGFAIAPLAGGMMIEYLNAQWLY 399
            +D LAP  LRGSY+GA  L +LG A++P+  G ++ +  A  ++
Sbjct: 311 FVDTLAPEELRGSYYGAQNLAALGGALSPVICGYLLMHTPAPTMF 355